Gene Sden_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1856 
Symbol 
ID4018339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2182842 
End bp2183864 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content34% 
IMG OID637955873 
Producthypothetical protein 
Protein accessionYP_562863 
Protein GI91793212 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGCAG CTAGTTTTGA TCAAAATAAA CGGAAGCTTG CTAGGCCGAT ATTAGAAGAA 
TTAGTTGAAG AAGGTAATGA TGATGCAATA TTGTTTTTTG CGCAGTTAGA ATTTGTAGGC
CAACTTGGAA ATACTTCTGA TAGGTTGTTC AAAGAGTATT ATCAAAGAAT AAAAGATAAA
GACTCGTCAG TTATTAAGGG CTATGAAGAG GAAAAAGCAG AAATGGAAAC CGTTATAGAG
TTACATTTCC CCTCTATTAA AAAACTTTAC AATGAAAACA ATCACTTGTG TGAGCAACCA
CTTGAGCACT CAATAAGTGC TCTAGAAAAA AACGCTAATA CATATCTGGT GGCTAAATAT
TTTAACCAGT GTTTAGCAAA ATACTCAATA ATGAACAGTA GACAACGCCT ACAGGCAATG
TCAAAGTTCC AAGCTATTGT TTGTAGTACA AAGAAAAATG GTAAAATTTG TATCAGTGAG
GGATATGATG CACTTAGTTC CGGTTTAAAT TCTGTTGAGC ACTCTTTTAC AGTCGCAACA
GTTGTTAGAG ATATTTATAC ATCATACAAA GAATTGTTGC GGAAAAAGTC GGGCGTACAA
AAGAGATATC CTTCTTCAAA AACTACTGAT GTTGTTACAA AAGCATTTGA TACCTATAAC
GAAAACAATC TCGATAAAAG CAGTGAGATG TTAATTAACT ATCTTAATAA TGAACCAAAG
CTGAGTTCGT ATGATATAGC ATCTGTACAG AGGATTATTT CCAATTTCCT TTATTTACGT
GAAAAAGAAG GTGATATTGC GCTGGCGATT GAGTATGCAA ATAAAGCATT AAATAGCAAC
GAACTCTATT TTAAAGAACA TTGGGAGCTG TTCGACTTTC TATCAAATTT ATACATTAGT
AATGAAGAAT ACTCAAAGTA TATCAAAATG ATCGGAGATT ACATTTTAGA AAATCAGGGA
GATATGGACC TTATTCCTAT AGCGAGTCTA CCGGACGTTA GTCATCATAT GGCTAACATA
TAA
 
Protein sequence
MYAASFDQNK RKLARPILEE LVEEGNDDAI LFFAQLEFVG QLGNTSDRLF KEYYQRIKDK 
DSSVIKGYEE EKAEMETVIE LHFPSIKKLY NENNHLCEQP LEHSISALEK NANTYLVAKY
FNQCLAKYSI MNSRQRLQAM SKFQAIVCST KKNGKICISE GYDALSSGLN SVEHSFTVAT
VVRDIYTSYK ELLRKKSGVQ KRYPSSKTTD VVTKAFDTYN ENNLDKSSEM LINYLNNEPK
LSSYDIASVQ RIISNFLYLR EKEGDIALAI EYANKALNSN ELYFKEHWEL FDFLSNLYIS
NEEYSKYIKM IGDYILENQG DMDLIPIASL PDVSHHMANI