| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1850 |
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| Symbol | |
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| ID | 4018333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2175930 |
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| End bp | 2176544 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955867 |
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| Product | cytochrome c oxidase, cbb3-type, subunit II |
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| Protein accession | YP_562857 |
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| Protein GI | 91793206 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000216797 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTTTA ATCATGAAGT CATTGAAAAG AATATCGGGC TATTGGCCAT ATTCACTGTA
ATCGCCATTA GTTTTGGTGG TTTAGTGCAG ATCACTCCAC TGCTGTTTCA AAAAGACACT
ACTCAGCCAA TTGAAGGCCA GATCCCTTAC ACTGCCCTGC AAATTGAAGG CCGTGACATC
TATATTCGTG AAGGTTGCTA TAACTGTCAC AGCCAGATGA TCCGTCCACT GCGAGCAGAG
ACTGAGCGTT ATGGTCACTA TTCTGTTGCT GGGGAGTCCG TTTGGGATCA CCCGTTCCAG
TGGGGCTCTA AACGTACAGG TCCTGATTTA GCCCGTGTGG GTGGCCGTTA CAGCGACAAA
TGGCATGAGG TTCATTTAAC TGATCCCCGC GCCGTTGTGC CACAGTCAAA CATGCCCGCC
TTCCCTTGGT TATTGGAAAA TACCTTAGAT GGCGAGTTGA CTGGCGCTAA GATGGACATC
TTACGCAAGC TCCATCCAAC TCATAATCTG TATACAGATA AAGAGATTGC TGGTGCGCAA
AAAGCAGTTG AAGGTAAAAC AGAGATGCAA GCCTTGATTG CTTACCTTCA ATCTTTGGGT
CATGCACTCA AATAA
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| Protein sequence | MKFNHEVIEK NIGLLAIFTV IAISFGGLVQ ITPLLFQKDT TQPIEGQIPY TALQIEGRDI
YIREGCYNCH SQMIRPLRAE TERYGHYSVA GESVWDHPFQ WGSKRTGPDL ARVGGRYSDK
WHEVHLTDPR AVVPQSNMPA FPWLLENTLD GELTGAKMDI LRKLHPTHNL YTDKEIAGAQ
KAVEGKTEMQ ALIAYLQSLG HALK
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