Gene Sden_1837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1837 
Symbolaat 
ID4018320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2163586 
End bp2164287 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content48% 
IMG OID637955854 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionYP_562844 
Protein GI91793193 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000118084 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGTCAC TGTGCTATCT AAATCAAGAA GATTGTTTTC CTGCTGCTCA TAAGGCGCTC 
ACCGATCCTA ATGGTCTTAT AGCCATTGGT GGCGATTTAC AGCCTGAGCG GCTTTTAAGC
GCCTATCAGC AAGGTATTTT TCCTTGGTTC AATCAGGGAG AGCCCATTCT ATGGTGGACT
CCAGATCCTA GGGCGGTATT TCAACTCAGC GACTATCGTC CTAGTCGCAG TTTAATGAAG
ACTCTGAAGC GCCAAACTTG GCGTTTTACC ATTAATAAAG CCTTCGATGC AGTGATCCAT
CAGTGTGCAG CCTTGCGCCA AGAAGGCACT TGGATTACCC CAGCCATCAA AGCCGCTTAC
GGCCAATTAC ACGCACAAGG CGATGCGCAC TCCATTGAGG TGTGGCAAGG TGAACAATTA
GTTGGTGGTT TATACGGTAT TGCAGTAGGG AAAATCTTCT GCGGCGAGAG CATGTTCCAC
CTAGAAACCG ATGCATCAAA AGCGGCATTT CATCTGCTAG TCACCCACTT AAGGCGATTT
GAGTTTACAC TCATAGATGC CCAAGTGATG AATCCTCATT TAGCCCGTTT AGGGGCAAAA
CCTTTGCCTC GGGAGGCTTT TTTGACTCAA TTAGCACAGC TTAAACATCA GCATAGCCCC
GCCACCGCTT GGCAGCCGCA AGAGGTTAAA CTTGGATACT AA
 
Protein sequence
MKSLCYLNQE DCFPAAHKAL TDPNGLIAIG GDLQPERLLS AYQQGIFPWF NQGEPILWWT 
PDPRAVFQLS DYRPSRSLMK TLKRQTWRFT INKAFDAVIH QCAALRQEGT WITPAIKAAY
GQLHAQGDAH SIEVWQGEQL VGGLYGIAVG KIFCGESMFH LETDASKAAF HLLVTHLRRF
EFTLIDAQVM NPHLARLGAK PLPREAFLTQ LAQLKHQHSP ATAWQPQEVK LGY