| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1832 |
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| Symbol | |
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| ID | 4018315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2159401 |
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| End bp | 2159604 |
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| Gene Length | 204 bp |
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| Protein Length | 67 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637955849 |
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| Product | CspD, cold shock |
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| Protein accession | YP_562839 |
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| Protein GI | 91793188 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0689958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAACG GAACGGTGAA ATGGTTCAAT AACGCCAAAG GATTCGGGTT TATCTGCCCA
GATCAAGGTG GCGATGATGT ATTTGCGCAC TACTCAACAA TTGAAATGGA AGGCTATAGA
ACTCTAAAAG CAGGCCAACC GGTTCAATTT GAAGTAGAGC AAGGCCCCAA AGGAATGCAC
GCCTCAGCCA TTTCAGCTAA ATAA
|
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| Protein sequence | MANGTVKWFN NAKGFGFICP DQGGDDVFAH YSTIEMEGYR TLKAGQPVQF EVEQGPKGMH
ASAISAK
|
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