| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1831 |
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| Symbol | |
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| ID | 4018314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2157091 |
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| End bp | 2159313 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955848 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_562838 |
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| Protein GI | 91793187 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.774798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATA ATTCTCCAAC TATCATCTAC ACAGAAACCG ATGAAGCGCC AGCACTGGCA
ACCTTATCTC TATTGCCTAT TATACGCACC TTTACCTCTG CAGCCGGGGT TAAAGTTGAA
ACCCGTGACA TTTCATTGTC GGGCCGTATC CTAGCTAACT TCCCAGAAAA GCTAACTGCT
GAGCAAAAAA TTGCTGATGC GTTAACTGAG TTAGGTGAAA TGGCTAATCG TCCAGAAGCT
AACATCATCA AGTTGCCAAA CATCAGTGCT TCTATTCCTC AGTTAAAAGT CTGTATCGCT
GAGCTTCAAG CCAAAGGCTA CGACATTCCA AACTACCCAG ATGAGCCTAA GAATGATGCT
GAAAAAGAAA CTCAGTCTCG TTATGACAAG ATTAAAGGCA GTGCGGTAAA TCCAGTATTG
CGTGAAGGCA ACTCTGACCG ACGTGCACCG ACGTCAGTGA AAAACTACGC CAAGAAACAC
CCACATTCAA TGGGTAAGTG GGCTAGCGAT TCAAAGTCTC ATGTTGCCCA CATGAATGAA
GGCGATTTCT ACGCTAGTGA GCAGTCTGTC ACCTTAACTA AAGCCGACAA AGTCAGCATA
GTGTTTGAAA AAGCCGATGG CACAGAGCAA GTATTAAAAG CAGGGTTAAG CTTACTCACT
GATGAAGTTA TCGATGCGGC AGTGATGAGC AACAAAGCCT TAATCGAATT CTATAGCCGT
GAAATCGAAG CCGCTAAATC TGAAGACGTG TTGTTATCAC TGCATTTAAA AGCCACCATG
ATGAAAGTCT CAGATCCTAT TCTGTTCGGT CATGCGGTTA AAGTCTTCTT CAAAGACGTG
TTTGTTAAGC ACGGCGCGTT ATTTGCTGAA CTTGGTGTTG ATGTTAACAA CGGCTTTGGC
GACGTGTATG CCAAAATTAA GTCGCTTCCA GAAGCAAAGC GTGCTGAAAT TGAAGCTGAC
ATTGCCGCTG TGTATGCCGC ACGTCCAGCC CTTGCCATGG TTGATTCTGA TAAAGGTATT
ACAAACCTTC ATGTGCCAAG TGACATCATC ATCGATGCCT CTATGCCAGC TGCTATTCGT
TCATCAGGTC AGATGTGGGG ACCCGATGGC CAGTTAAAAG ACACTAAAGC CTTGATCCCA
GATCGCTGCT ACGCCGGTGT TTACCAAGAA ACGATAGCCT TTTGTAAAGC CAATGGCGCC
TTTAACCCAA GCACTATGGG CAGCGTGCCA AACGTAGGTC TAATGGCGCA AAAAGCCGAA
GAGTACGGTA GTCACGACAA GACATTCGAA ATCAAAGCCA AAGGTACGGT TAAGGTGATT
AACCAAGCTG GCGATGTGTT AATGAGCCAT GATGTCGATA GCGGTGATAT TTACCGTATG
TGTCAGGTTA AAGATGCACC CATTCGTGAC TGGGTAAAAC TTGCAGTTAA GCGTGCACGT
TTAAGCAACA CGCCAGCCAT TTTCTGGTTA GACAGCAAGC GTGCTCACGA TGCAGAGCTT
ATCAAGAAAG TGAACCAGTA TTTACCTGAG CATGACACTA GCGGCTTAGA CATCCAGATA
ATGTCACCGG TTGAAGCGAC TCGTGCTACC TTAGCGCGCA TCATCAAAGG TGAGGACACT
ATCTCAGTGA CCGGTAACGT ATTACGTGAC TACCTAACTG ACTTGTTCCC CATTCTTGAA
TTAGGCACCA GTGCTAAAAT GCTGTCTATT GTGCCCTTAA TGAACGGCGG CGGCTTGTTT
GAAACAGGCG CAGGTGGCAG TGCACCAAAG CACGTGCAGC AGGTTGAGAA AGAAGGTCAC
TTACGTTGGG ATTCTCTTGG TGAATTCTTG GCCTTAGCGG CATCCCTTGA GCATTTAAGC
CAGACTCAAT CAAACCCTAA AGCTCAAGTG CTTGCAGATA GCTTAGATGT GGCCATTGGT
GTGTTCCTTG ATACCAACAA GTCACCTTCA CGCCGTGTGG GTGAGCTTGA TAACCGTGGA
AGTCACTTCT ACCTTGCTAT GTATTGGGCA CAAGCCTTAG CAGCGCAAAC GGCAGATGCT
GAACTTGCGG CGCATTTTGC AACTCTTGCT AATGCACTTA GCACTCAGGA AGAAATCATC
ATAGCTGAAC TTAATGGTTC ACAAGGTCCT GCGGTAGATT TAGGTGGTTA TTACCGTTTA
GATCTGGCTA AAGCCAGCAA GGCGATGCGC CCAAGTGCCA CTTTGAATGC ACTGATCGAC
TAA
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| Protein sequence | MKDNSPTIIY TETDEAPALA TLSLLPIIRT FTSAAGVKVE TRDISLSGRI LANFPEKLTA
EQKIADALTE LGEMANRPEA NIIKLPNISA SIPQLKVCIA ELQAKGYDIP NYPDEPKNDA
EKETQSRYDK IKGSAVNPVL REGNSDRRAP TSVKNYAKKH PHSMGKWASD SKSHVAHMNE
GDFYASEQSV TLTKADKVSI VFEKADGTEQ VLKAGLSLLT DEVIDAAVMS NKALIEFYSR
EIEAAKSEDV LLSLHLKATM MKVSDPILFG HAVKVFFKDV FVKHGALFAE LGVDVNNGFG
DVYAKIKSLP EAKRAEIEAD IAAVYAARPA LAMVDSDKGI TNLHVPSDII IDASMPAAIR
SSGQMWGPDG QLKDTKALIP DRCYAGVYQE TIAFCKANGA FNPSTMGSVP NVGLMAQKAE
EYGSHDKTFE IKAKGTVKVI NQAGDVLMSH DVDSGDIYRM CQVKDAPIRD WVKLAVKRAR
LSNTPAIFWL DSKRAHDAEL IKKVNQYLPE HDTSGLDIQI MSPVEATRAT LARIIKGEDT
ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKEGH
LRWDSLGEFL ALAASLEHLS QTQSNPKAQV LADSLDVAIG VFLDTNKSPS RRVGELDNRG
SHFYLAMYWA QALAAQTADA ELAAHFATLA NALSTQEEII IAELNGSQGP AVDLGGYYRL
DLAKASKAMR PSATLNALID
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