Gene Sden_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1818 
Symbol 
ID4018301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2143712 
End bp2143969 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content44% 
IMG OID637955835 
Productphosphotransferase system, HPr 
Protein accessionYP_562825 
Protein GI91793174 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCAAA AGTCATTGAC CATCACAGCC CCCCATGGGA TCCACACTCG TCCAGCAGCA 
TTAATAGTGA AAGAAGCGAA AACCTTTGAC TGTGATGTCA TTGTCGAATG TAATGGCAAG
AAAGCCAGTG CTAAGAGCCT GTTTAAATTA CAAACCTTGG GTTTGTACCA AGGCGTTGAT
GTGACTGTGA GTGCCCAAGG CGTGCAGGCT GAAACAGCGG TCAATCAAAT TGCATTCATG
CTTTCAAGCT TAGAATAA
 
Protein sequence
MYQKSLTITA PHGIHTRPAA LIVKEAKTFD CDVIVECNGK KASAKSLFKL QTLGLYQGVD 
VTVSAQGVQA ETAVNQIAFM LSSLE