| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1817 |
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| Symbol | |
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| ID | 4018300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2141902 |
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| End bp | 2143638 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955834 |
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| Product | phosphoenolpyruvate-protein phosphotransferase |
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| Protein accession | YP_562824 |
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| Protein GI | 91793173 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATTA CAGGGACCTT AGTATCATCG GGTATCGCCT TCGGTGAAGC ACGGCTTATA
CCGGCTCACA AGCATTCTTT AGATGTTCGA CTCATATCCC CTACAGGCAT TATCAAAGAA
CAAATCAAAC TCAAGGGGGC GATTAAGCAA CTTTGCCAGC ACTTGCGCCA CTGCCAAGGT
AATTTTGCTC CAGAGCAAGA CACCTTCGAG TTAATCGATG CCGACATACT CTTACTCGAA
GATCCTGAGT TGCATCATGC ACTTAATGAG CACATTGATA AATTTCGCTT TAGTGCTCAA
GTGGCCGTTG ATAGAATATT TACCCAGCAA GCCGATGAAT TAGCTCAGCT TGACGATCCT
TATTTAGCCA ATCGTAGTTT GGATATTCGA AGCCTTGGAC AACGCCTTAT CAACGCCCTT
AATGGTGATC TGGCCCTGGA TCTTTCAGCA ATCACCCAAG ACTGTATCAT TTTGGCTCAA
GACTTAACCC CCGCTGAATT TGGCCAGCTG CCGCTTCAAT TTATCAAGGG ATTAGTGTTG
CAAACTGGCA GCGTTACAAG CCACACCGCG ATTCTTGCAA GGGCTGCGGA TATTCCGACA
CTAGTGAACT GTCAATGGCA AGATGGCCCT CACTCAGGCT CAAACCTTGG CATAAAAAAT
GGCGATAAAT TAATATTAGA TGCAATAGCT GGCGAACTAT TTAATGATCC CTCGCCAGAT
CTGCAAACAA AATTGCAGCA AAAGTATCAG GCAGAGCAGC AAAGACGCCA AGCGTTAGCC
CAATACAAGT GCCGCCCCAG TGAAACTCGT GACGGTCACC AGGTTTCCAT CAGGGCCAAT
GTGGGGGATT TAAACGACGT GCTCAGGCTA ACCGATACCG GTGCCCAAGG TGTTGGCTTG
TTTCGCACCG AGTTTTTACT TATTCATGCC AAGCAAGTGC CAACAGAGCA ACAACAGTAT
CAACTCTATT GCGATGCACT GCACAGTTTA GACGGCCAAG TACTGACGAT ACGCACCTTC
GATATAGGTG CCGATAAAGC GCTGCCCTGT CTTAATCAAG CCAAAGAAGA TAATCCTGCT
TTAGGTTTAA GGGGCATTCG TTACAGTTTG GCTCAACCCA GTTTATTACA GCCGCAATTG
CGCGCTGTGC TCAGGGCGGC TAATCATGGT CCTATTAGGC TCATGTTCCC CATGCTGAAT
CAGCTAGAAG AACTGGAACT GCTGATCGGC CAAATTGAGC TATGTAAAGC GCAATTAATC
GAGCAAGAAA AAGGATTTGG TGAACTCAGC CTTGGCATAG TCATAGAAAC ACCGGCTGCA
GTATTAAATT TACCCAGTTT ATTGCCCTTA TTGGACTTTG TCAGCATAGG CAGTAACGAT
CTAAGCCAGT ATACTCAAGC AGTAGACAGA ACTAACTCAG CGTTAACCAA AAACTTTTCC
CCCCTGTCAC CGCCTGTGCT TAAGCTTATC GCCATGACAG TTGAATGTTG CAAGGCACAA
AATAAGCCCA TAAGCCTGTG TGGCGAGCTG GCAAGCGACC CTAAATTAAC CCCGCTGCTC
GTGGGCCTTG GTATTAATGA ACTCAGTGTT ACGCCGGGAC AGATTTTAGA AGTGAAAGCC
GCACTGTGTT TAGGTGAGTT TGGCGGTGAT AGCGGCTTTT ATGCTCATGG TAAAGACGCG
CTGTCCAAAA GTAGGATGCT AGACCTAGCT CAGTGTGTTT CTGATTACAA TCAATAA
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| Protein sequence | MPITGTLVSS GIAFGEARLI PAHKHSLDVR LISPTGIIKE QIKLKGAIKQ LCQHLRHCQG
NFAPEQDTFE LIDADILLLE DPELHHALNE HIDKFRFSAQ VAVDRIFTQQ ADELAQLDDP
YLANRSLDIR SLGQRLINAL NGDLALDLSA ITQDCIILAQ DLTPAEFGQL PLQFIKGLVL
QTGSVTSHTA ILARAADIPT LVNCQWQDGP HSGSNLGIKN GDKLILDAIA GELFNDPSPD
LQTKLQQKYQ AEQQRRQALA QYKCRPSETR DGHQVSIRAN VGDLNDVLRL TDTGAQGVGL
FRTEFLLIHA KQVPTEQQQY QLYCDALHSL DGQVLTIRTF DIGADKALPC LNQAKEDNPA
LGLRGIRYSL AQPSLLQPQL RAVLRAANHG PIRLMFPMLN QLEELELLIG QIELCKAQLI
EQEKGFGELS LGIVIETPAA VLNLPSLLPL LDFVSIGSND LSQYTQAVDR TNSALTKNFS
PLSPPVLKLI AMTVECCKAQ NKPISLCGEL ASDPKLTPLL VGLGINELSV TPGQILEVKA
ALCLGEFGGD SGFYAHGKDA LSKSRMLDLA QCVSDYNQ
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