Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1810 |
Symbol | |
ID | 4018292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2135717 |
End bp | 2136619 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637955826 |
Product | putative DNA-binding transcriptional regulator |
Protein accession | YP_562817 |
Protein GI | 91793166 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000533162 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTCAG AACAAGCCTT AGAAATGATC GATATTGTGG CCCGTGTGGG TAGCTTTACC GCTGCGGCCA ATAAATTGAA CAAGGTGCCT TCGGCGGTGA GTTATGCCGT CAAACAAATT GAAGATGACT TAGGGGTTAT CTTGTTCGAA CGTCATCATA GAAGTGTCAG CCTCACACCC GCGGGACAAC ATTTTGTTAA TCAAAGCCGC GAGATCATCA ATCAACTCAC TGCCATTAAG CGTGATACCC AAAAAGTGGC CAATGGCTGG CGGCCATCCA TTTCGATTGC CATCGATAAT ATGGTTCGCG CCGATAGAAT AAGCGTGCTT ATCGCCGATT TTTACCGTCA GTTTAGCGAT ATCGAGCTTA TCATACGTTT AGAAGTGTAT AACGGTGTGT GGGAAACCTT ATCTAGTGGC CGCAGTCAAT TAGCCATAGG GGCTAGCGCC ACCTTACCGG TTGGCGGCAG TTTCAAAATT CGCGATATGG GTACCATTGA ATGGGTGTTC TTAGTCAGTA AAAATCATCC TTTGGCTGAA ATTGAACATC CGTTAACGGC GGAAGATCTC ATGCCTTTCC CCGCCATTTG CTTAGAAGAC ACCGCCATAG ATATACCGCC TCGCGCCAAT TGGTTGCTGA AGAATCAACG CCGCTTGGTG GTCCCTGACT GGATAAGAGC GCTGAACTGC TTTCGAGAAG GCCTAGGCAT AGGCTATATG CCCGCCCACT TAGCCAGCGT GTTCGTTATG TCTGGGGCCT TATTAGAAAA AACCTTGGCC GAGCCTAAGA AAGATACCCA ATGCAGCCTA GCCTGGGATC AATCACAAAT GAGTCCGGCC ATGGCATGGA TCTTAGATTA TTTAGGTGAC AGCGAACAAT TGCACAAGCA ATGGTTAACC TAG
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Protein sequence | MLSEQALEMI DIVARVGSFT AAANKLNKVP SAVSYAVKQI EDDLGVILFE RHHRSVSLTP AGQHFVNQSR EIINQLTAIK RDTQKVANGW RPSISIAIDN MVRADRISVL IADFYRQFSD IELIIRLEVY NGVWETLSSG RSQLAIGASA TLPVGGSFKI RDMGTIEWVF LVSKNHPLAE IEHPLTAEDL MPFPAICLED TAIDIPPRAN WLLKNQRRLV VPDWIRALNC FREGLGIGYM PAHLASVFVM SGALLEKTLA EPKKDTQCSL AWDQSQMSPA MAWILDYLGD SEQLHKQWLT
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