| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1797 |
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| Symbol | |
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| ID | 4018279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2124011 |
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| End bp | 2126041 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955813 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_562804 |
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| Protein GI | 91793153 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000373442 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTAGCG CCAAATTCGA TCTTCATTTC CCATTCCCAC CCGCTGGGGA TCAGCCTACC
GCTATTCGTA AATTAGTCGA AGGCTTAGAG GCGGGACTTG CCTGCCAAAC CTTGCTTGGG
GTGACAGGTT CGGGTAAGAC TTACACCATA GCCAATGTCA TTAAAACCAT GGGGCGGCCC
ACCATCATCA TGGCCCCGAA CAAGACATTA GCGGCCCAGC TTTATGGCGA GATGAAGGAA
TTTTTCCCCA ATAACGCCGT CGAATATTTC GTGTCTTATT ATGACTACTA TCAGCCCGAA
GCTTACGTGC CAGCCTCCAA TACCTTTATC GAGAAAGATG CCTCGGTTAA CGCTCACATT
GAACAAATGC GTTTGTCTGC CACAAAAGCC CTGCTAGAAC GCAAAGATGT GGTGTTAATT
GCGTCTGTTT CTGCTATTTA CGGTTTGGGA GACCCAGACT CTTACTTGAA AATGCTGCTG
CATCTGCGCC AAGGGGATCC CATGGGGCAG CGTGATATCT TGCACCGTTT GAGTGAGTTG
CAATATAAGC GCAATGACAT TGAGTTATCC CGCGGCACCT ATCGTGTGCG CGGTGAAGTG
ATAGATATTT TTCCTGCAGA TTCCGAGCGT GATGCCATCA GGGTAGAGCT CTTCGATGAT
GAAATTGAGC GGCTAAGCGA ATTTGATCCC TTAACGGGTC AGATTAAAAA ACGTCTAGCC
CGCACCACGG TTTACCCTAA GACTCATTAC GTGACCCCAA GGGAAAAAAT AATTGCTGCC
ACCGAGTTCA TCAAGGAAGA GCTGCGGGAG CGGCGTCAGC ATTTGCTAGA TAACAATAAA
TTAATTGAAG CCCAAAGGAT CACTGAGCGG GTGCAATACG ATGTGGAAAT GATGGTGGAG
CTAGGTTATT GCTCAGGCAT TGAAAACTAC TCCCGCTATC TCTCGGGTCG GACTCCTGGC
AGTGCACCGC CGACTTTGCT GGATTATTTA CCCAGTGACG GCTTGCTGAT TATTGACGAG
TCCCATGTCA CAGTGCCGCA AATTGGCGCC ATGTATAAGG GCGATCGCAG CCGTAAAACC
ACCTTAGTGG AATATGGCTT TCGCTTACCC AGTGCATTGG ATAATCGGCC GCTTAAATTT
GAAGAATTTG AACAGCTGAT GCCGCAAACC GTGTTTGTGT CGGCGACCCC AAGCCAATAT
GAGTTCGATA AGAGTGCAGG GGAGATTGCC GAGCAAGTGG TGCGCCCCAC AGGACTGTTA
GATCCTGTGT TGGAGATAAG ACCTGTAGCG ATACAAGTGG ATGATTTATT ATCAGAAATT
GCTAAACGAG TGGCAGTTAA TGAGCGTGTT TTGGTCACCA CACTCACCAA AAAAATGTCT
GAAGATCTTA CCGATTATCT CGATGAGCAC GGGGTCAAGG TACGCTACTT ACACTCAGAC
ATAGACACAG TGGAGCGAGT GGAAATCATT CGCGATTTAC GCTTAGGCAA ATTTGATGTG
CTAGTGGGTA TCAACTTGTT GCGTGAAGGA TTAGACATGC CGGAAGTGTC ACTGGTGTGT
ATTTTAGATG CGGATAAAGA AGGCTTTTTG CGCTCAGAAC GTTCACTCAT TCAGACCATA
GGCCGCGCTG CCCGCAACAT TAACGGCAAG GTTATTCTCT ATGCCGACAG GGTGACCAAG
TCTATGGCCA AGGCCATCGA AGAAACTGAC CGACGCCGTG AAAAGCAGCA CCAGCATAAT
CTTGCCAATG GCATTACTCC CAAGGGGGTG GTGAAATCCA TTACCGATGT CATGGATGTG
GGTGATGAAA ACTCCACTAC AGGCTATCGG AAAACCGCGC CTATGCCAGG CAAAGTAGCC
AGCAAACCAG GTCAATATGA CGATCTTAAC AGCATTTCTG AGCTGAGCCG TGCCATTGAA
AAGCTTGAAA AGCAGATGCT ACAACACGCA AGAGATCTGG AGTTTGAACA AGCCGCAGCG
CTTCGAGATG AAGTCCATGC CCTGAGGGAG CGGATCATCA AGATAAGCTA A
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| Protein sequence | MSSAKFDLHF PFPPAGDQPT AIRKLVEGLE AGLACQTLLG VTGSGKTYTI ANVIKTMGRP
TIIMAPNKTL AAQLYGEMKE FFPNNAVEYF VSYYDYYQPE AYVPASNTFI EKDASVNAHI
EQMRLSATKA LLERKDVVLI ASVSAIYGLG DPDSYLKMLL HLRQGDPMGQ RDILHRLSEL
QYKRNDIELS RGTYRVRGEV IDIFPADSER DAIRVELFDD EIERLSEFDP LTGQIKKRLA
RTTVYPKTHY VTPREKIIAA TEFIKEELRE RRQHLLDNNK LIEAQRITER VQYDVEMMVE
LGYCSGIENY SRYLSGRTPG SAPPTLLDYL PSDGLLIIDE SHVTVPQIGA MYKGDRSRKT
TLVEYGFRLP SALDNRPLKF EEFEQLMPQT VFVSATPSQY EFDKSAGEIA EQVVRPTGLL
DPVLEIRPVA IQVDDLLSEI AKRVAVNERV LVTTLTKKMS EDLTDYLDEH GVKVRYLHSD
IDTVERVEII RDLRLGKFDV LVGINLLREG LDMPEVSLVC ILDADKEGFL RSERSLIQTI
GRAARNINGK VILYADRVTK SMAKAIEETD RRREKQHQHN LANGITPKGV VKSITDVMDV
GDENSTTGYR KTAPMPGKVA SKPGQYDDLN SISELSRAIE KLEKQMLQHA RDLEFEQAAA
LRDEVHALRE RIIKIS
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