| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1787 |
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| Symbol | |
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| ID | 4018266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2111365 |
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| End bp | 2112342 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955800 |
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| Product | transketolase, central region |
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| Protein accession | YP_562794 |
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| Protein GI | 91793143 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.172502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCAGAAA TGAACATGTT ACACGCCATC AATGAGGCGT TATCCATTGC CATGCAGACT
AATGAGCGCA CAGTGATCTT CGGAGAAGAT GTGGGCCATT TTGGTGGCGT TTTTAGGGCG
ACGTCTGGCT TACAAGAAAA GTTTGGCCGT GATCGTTGTT TTAACACGCC ATTAACGGAG
CAAGGTATTG CAGGTTTTGC CAACGGTTTA GCGTCAAATG GCATGAACGC AGTGGCTGAA
ATCCAGTTTG CCGATTATAT CTTTCCAGCA TTCGATCAAA TCGTTAATGA ATCTGCCAAA
TTCAGGTACC GCAGTGGTAA TGAATTCGAT GTAGGTGGTT TAACCTTTAG AACGCCCTAT
GGTGGAGGTA TTGCCGGTGG TCATTATCAC TCTCAATCTC CTGAAGCTTA TTTTACCCAA
ACACCAGGCC TTAAAGTGGT GGTGCCGCGT AATCCACAGC AGGCAAAAGG TTTGCTATTA
GCCGCAATTC GCGACCCAAA TCCAGTGATA TTCTTCGAAC CTAAGCGCCT TTATCGTGCT
TCAGTGGGCG AAGTACCTGC GGGGGATTAC GAAATTGAGC TAGGTAAAGC CGAAGTTGTC
AAACAAGGTA AGGATATTAC CTTAGTGGCC TGGGGCGCAC AGATGGAAAT CGTCGAGAAA
GCTGCCGCAC GGGCTGAAGC CGAAGGGATT TCCTGTGAAA TTATCGACCT TCGTACCTTA
TCCCCATGGG ATGAAGACAC AATAGCGGCA TCGGTCAAGA AAACAGGGCG TTTGTTGATT
AATCATGAAG CGCCATTAAC CGGCGGTTTC GCTGGTGAAA TAGCGGCCAC GATACAAGAG
TCCTGTTTCT TACACTTAGA ATCTCCCATT AGCCGAGTGT GTGGTCTAGA TACGCCTTAC
CCACTTATTC ACGAAAAAGA ATACATGCCA GATGAGCTAA AGACCTTTGA AGCCATCAAG
GCCTCAATGG CATTTTAG
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| Protein sequence | MPEMNMLHAI NEALSIAMQT NERTVIFGED VGHFGGVFRA TSGLQEKFGR DRCFNTPLTE
QGIAGFANGL ASNGMNAVAE IQFADYIFPA FDQIVNESAK FRYRSGNEFD VGGLTFRTPY
GGGIAGGHYH SQSPEAYFTQ TPGLKVVVPR NPQQAKGLLL AAIRDPNPVI FFEPKRLYRA
SVGEVPAGDY EIELGKAEVV KQGKDITLVA WGAQMEIVEK AAARAEAEGI SCEIIDLRTL
SPWDEDTIAA SVKKTGRLLI NHEAPLTGGF AGEIAATIQE SCFLHLESPI SRVCGLDTPY
PLIHEKEYMP DELKTFEAIK ASMAF
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