| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1770 |
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| Symbol | |
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| ID | 4018249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2092233 |
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| End bp | 2094293 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955783 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_562777 |
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| Protein GI | 91793126 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCGC GTCGTGAAAC CCGTGCTAGT GCACAAACAT TTATTGAAAA TCTAAAACCT
TTACAACACC CCAATTCTGA GAAGGTATTC CTTAGCGGAA GCCGCCCAGA TCTTAGGGTG
GGCATGCGTC AAATTCATCA GACCGACACT CTGCACGCAA AAACCAATGG TGAGACGCTG
CGGGAGCAAA ATCCGCCTAT CATGGTTTAT GATTGCGCTG GTGCATATTC TGATCCCAAT
GCCGATATTA ATGTCCATGC AGGTCTTGAA AAATTTAGGC AGTCTTGGAT TGAAGAGCGT
CAAGATACTG AGCTGCTTAA GGGGGTGAGC TCACAATTTA CCCAGCAGCG TTTAGCAGAT
GATGGTCTAG ATCATTTGCG TTTTGATGCA CTTGTCAAAC CAAGACGAGC TAAAGCCGGA
CGATGCGTGA CCCAAATGCA TTATGCAAGA CGGGGGATCA TTACCCCTGA GATGGAATAT
ATTGCCATAC GTGAAAACAT GGCCCGTGAA CATGTCCCAG AAGGGGTGTT AACCCAAAAA
TCTGCTGGTG AATCCTTTGG TGCTTGCATA GGAGAGCCCA TCACGGCTGA ATTTGTGCGC
TCCGAAGTGG CTCGGGGCCG CGCTATTATC CCGCTAAACA TCAATCACCC AGAAGCTGAA
CCTATGATCA TAGGTCGCAA TTTCTTAGTT AAGGTGAATG CCAATATCGG TAATTCTGCA
GTGACTTCCT CCATCGAAGA AGAAGTGGAG AAGCTAGTTT GGTCTACCCG CTGGGGCGCA
GATACTGTGA TGGACTTGTC CACCGGGCGC TATATTCATG AAACCCGTGA ATGGATCATT
CGTAATTCTC CTGTACCCAT AGGTACTGTG CCCATCTACC AAGCGTTAGA AAAAGTAAAT
GGGGTCGCCG AAGATCTTAA CTGGGAAGTG TTTCGCGATA CCCTAATTGA ACAGGCCGAG
CAAGGAGTGG ATTACTTCAC TATCCATGCT GGTGTGTTAC TCAGGTACGT CCCCATGACA
GCAAAACGCT TAACGGGCAT AGTGTCTCGG GGCGGTTCTA TCATGGCAAA ATGGTGTCTG
AGCCATCATA AAGAAAGCTT TTTATATGAG CACTTTAGAG AAATCTGTGA ACTGTGCGCC
GCCTATGATG TGTCGCTGTC CCTTGGTGAT GGTATGCGCC CAGGCTGCAT AGCTGACGCT
AACGATGAAG CCCAATTTGC AGAACTTGAA ACCTTAGGTG AGTTAGTGAA AATTGCCTGG
GAATACGATG TGCAAACCAT TATCGAAGGC CCAGGTCATG TGCCTATGCA CTTGATTAAA
GTGAACATGG AAAAGCAGCT TGAGCACTGT GATGAAGCGC CGTTTTATAC CTTGGGCCCG
CAAACCACAG ATATTGCACC TGGGTATGAT CATTTCACCT CAGGCATAGG TGCCGCTCAA
ATGGCTTGGT ATGGCTGCGC CATGCTGTGC TATGTCACCC CAAAGGAGCA TTTGGGGCTG
CCCAATAAAG AAGATGTTAA ACAAGGGCTT ATCGCATACA AAATTGCTGC TCACGCCGCT
GACATTGCCA AAGGCCACCC GGGGGCGCAA GTGCGTGACA ATGCTTTGTC GAAAGCTAGG
TTTGAGTTCC GCTGGGAGGA TCAATACAAC CTAGGGTTAG ATCCAGATAC TGCTCGTGCG
TACCACGATG AATCTTTACC CCAAGAATCC GCTAAGGTGG CGCACTTTTG CTCTATGTGT
GGGCCTAAGT TTTGCTCGAT GAAAATCACC CAAGAAGTCA GAGAATACGC CGCCGATCAA
GAAGCGAAAG CGCTGTTAGC ACAAGCACCG TTAGCACAAG CTAATATTCA GGATGTTGAA
CTTATTAGTC CTGATGAGTA TAAGGCGCGC CAAGCCACAG AAGCAGATCT TGCTAAGGCA
ATGGCACAAA AGTCGGCTGA GTTTAAATCC CAAGGCTCAG CCCTGTATCA CAGCATTGAC
AGCAGCGGAA TTAACGACAA CAAAAATGAT CAACAAGATG CAAGTGTTGT CCGAGTCCCA
AGCCTCGAAA TTGAGGGCTA A
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| Protein sequence | MSSRRETRAS AQTFIENLKP LQHPNSEKVF LSGSRPDLRV GMRQIHQTDT LHAKTNGETL
REQNPPIMVY DCAGAYSDPN ADINVHAGLE KFRQSWIEER QDTELLKGVS SQFTQQRLAD
DGLDHLRFDA LVKPRRAKAG RCVTQMHYAR RGIITPEMEY IAIRENMARE HVPEGVLTQK
SAGESFGACI GEPITAEFVR SEVARGRAII PLNINHPEAE PMIIGRNFLV KVNANIGNSA
VTSSIEEEVE KLVWSTRWGA DTVMDLSTGR YIHETREWII RNSPVPIGTV PIYQALEKVN
GVAEDLNWEV FRDTLIEQAE QGVDYFTIHA GVLLRYVPMT AKRLTGIVSR GGSIMAKWCL
SHHKESFLYE HFREICELCA AYDVSLSLGD GMRPGCIADA NDEAQFAELE TLGELVKIAW
EYDVQTIIEG PGHVPMHLIK VNMEKQLEHC DEAPFYTLGP QTTDIAPGYD HFTSGIGAAQ
MAWYGCAMLC YVTPKEHLGL PNKEDVKQGL IAYKIAAHAA DIAKGHPGAQ VRDNALSKAR
FEFRWEDQYN LGLDPDTARA YHDESLPQES AKVAHFCSMC GPKFCSMKIT QEVREYAADQ
EAKALLAQAP LAQANIQDVE LISPDEYKAR QATEADLAKA MAQKSAEFKS QGSALYHSID
SSGINDNKND QQDASVVRVP SLEIEG
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