| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1761 |
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| Symbol | |
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| ID | 4018239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2081797 |
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| End bp | 2083548 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955774 |
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| Product | acyl-CoA dehydrogenase-like protein |
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| Protein accession | YP_562768 |
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| Protein GI | 91793117 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.170818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCTT ACCAAGCTCC ATTGCAAGAT ATGCAGTTCT TACTCACTCA AGTCTTTGAT
GCCCCAAACA CTTGGGAGCA ACTGCCAGCC ATCGCTGAAA TGCTCGACAT GGACACGGCC
AGTGCCATTT TAGAAGAGGC GGCCAAACTC AACCGTGATG TGATGCACCC GCTGAATCGC
AGTGGCGATG AGCAAGGGGT GAGTTTTGTT GATGGTAAAG TGATAACGCC TGATGGCTTC
AAAGCGGCTT ACGATACCTT CGCTCAAGGT GGTTGGGTTG GGCTATGTGG CGATCCTGAG
TTTGGCGGCA TGGGCATGCC AAAGATGCTT GGGGTGTTAG TGGATGAAAT GGGCTACAGT
GCCAATAACT CCTTTACGCT TTATAGCTCG CTCACAGCTG GTGCGGCCTT GTGTATTCAT
GCCCACGCCA GTGATGAATT GAAAACCACT TATTTACCTC ATTTATATTC TGGCCATTGG
GCGGGTGCCA TGGACATGAC TGAGCCTCAG GCGGGTTCAG ACTTAAGAAA CATTCGCACT
AAAGCTGTGC CACAGGAAGA TGGCAGTTAC CAAATTACTG GCAGTAAGAT ATTTATCACA
GGTGGCGATC AAGACTTAAC GGAAAACGTT ATCCACTTAG TGCTAGCAAA ATTGCCAGAC
TCGAATGGTA TTTCACTGTT TTTAGTGCCA AAAATCGCGG TGAATGCCGA TGGCAGCTTA
GGTGAGGCGA ATGGCGTCAC TGTGGGCTCA ATTGAGCACA AGATGGGCCT TAAAGCGTCG
GCAACTTGTG TAATGAATTT TGATAGCGCC AGAGGTTTCT TAATTGGTGA AGCCAATCGC
GGTCTAGCCT GCATGTTCAC CATGATGAAC TACGAGCGTC TCGCCATTGG TATTCAAGGC
CTTGGTAGCG CACAAGCGGC GTATCAGATG GCGCGGGATT ATGCCAATGA GCGAATTCAG
GGCACGGCGG CAGATGCCAC CGAAAAGCGA AACGATCCAA TTATTGTCCA CGGCGATGTG
CGCCGCATGC TATTAACCGT TAATGCCATG ACCCAAGCGG GTAGAGCATT AGCCGTGATG
ACTGGCAAGC AGTTAGATCT AGCCAAATAC GCTACTGGTG ACATTCAGCA AAAAGCCGCT
AAATACGTCG GGCTATTAAC GCCGGTGGCC AAAGCCTTCT TAACCGATCG CGGTCTTGAT
GCGACTATTA TGTCCCAGCA AGTGTTCGGT GGTCATGGTT ATATTCGTGA AACAGGCATA
GAGCAGTTAG TCCGCGATAC CCGAATTGCA CAAATATACG AAGGCACCAA TGGTATTCAA
GCACTTGATT TTATAGGCCG CAAAGTGACA GGTGATGATT TACATGCCTT AAGCTTATTG
GTTGATGATA TCAAAGTCGA GTTGGCTAGT TTTGACAAGA TAAAGCCTGA AGATAAACAG
GCGGTATTAT CAAGACTTGA TGCCTTGATG CAGACGGCAC AATTTGTCAA TGATAATAAG
GCGCAGCATC CGGCATTGCT CAATGCTTCA GCAGTCGACT TCCTCGATGC CTTTGGTTAC
ACCTTATACG GATACTTCTG GCTTGCTATG GCGCAGCAAT CTCATAAGGT AGAAGATAAA
AACTTCACCG CCACTAAGCA ATACCTTGCT GATTTTTACA TCAATAAACT ATTGCATAAA
GCCGATTACC ATTTGGCCCA AGTGAATGCC GGTGACAGCA GCATCATGGG AATGCCAGCA
GAGTTGTTCT AA
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| Protein sequence | MNPYQAPLQD MQFLLTQVFD APNTWEQLPA IAEMLDMDTA SAILEEAAKL NRDVMHPLNR
SGDEQGVSFV DGKVITPDGF KAAYDTFAQG GWVGLCGDPE FGGMGMPKML GVLVDEMGYS
ANNSFTLYSS LTAGAALCIH AHASDELKTT YLPHLYSGHW AGAMDMTEPQ AGSDLRNIRT
KAVPQEDGSY QITGSKIFIT GGDQDLTENV IHLVLAKLPD SNGISLFLVP KIAVNADGSL
GEANGVTVGS IEHKMGLKAS ATCVMNFDSA RGFLIGEANR GLACMFTMMN YERLAIGIQG
LGSAQAAYQM ARDYANERIQ GTAADATEKR NDPIIVHGDV RRMLLTVNAM TQAGRALAVM
TGKQLDLAKY ATGDIQQKAA KYVGLLTPVA KAFLTDRGLD ATIMSQQVFG GHGYIRETGI
EQLVRDTRIA QIYEGTNGIQ ALDFIGRKVT GDDLHALSLL VDDIKVELAS FDKIKPEDKQ
AVLSRLDALM QTAQFVNDNK AQHPALLNAS AVDFLDAFGY TLYGYFWLAM AQQSHKVEDK
NFTATKQYLA DFYINKLLHK ADYHLAQVNA GDSSIMGMPA ELF
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