| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1758 |
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| Symbol | |
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| ID | 4018236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2079247 |
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| End bp | 2080059 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637955771 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_562765 |
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| Protein GI | 91793114 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.259984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAT ACACAGGCAA AAATGTGGTG GTAGTCGGTG GTACCAGTGG CATTAACCTG
CAAATCGCCT TGAGCTTTGC AACTGCTGGC GCCAATGTGG CCGTGGCGAG TCGCAATCAA
GACAAGGTCG ACGCCGCAGT CAGTCAGTTG CAAATGGCGA ACCCACAAGG TAAACACTTT
GGGGTGAGTT TCGATGTGCG TGATAACGAC GCCTTAACCA CAGGTTTTGC GCTGATAGCC
ACCAACATGG GCCAGATTGA TGTGCTGGTC AGTGGCGCAG CCGGTAATTT CCCCGCAAGT
GCCGCCAAAC TTTCACCCAA CGGCTTTAAA TCTGTGATGG ATATCGATTT ATTGGGTAGT
TTTCAAGTGC TCAAACAAGC TTATCCATTA ATGGCACGTC CAAGTGGCAG CATAATTCAA
ATATCAGCAC CGCAGGCCTA TGTGGCCATG CCACTGCAAG CCCATGTGTG CGCCGCCAAA
GCTGGCGTAG ATATGCTAAC CCGCACCTTA GCCTTAGAGT GGGGCGTTGA AGGCATACGA
ATTAACTCCA TAGTACCAGG GCCCATTGCT GATACTGAAG GCTTTAATCG CTTAGCACCG
AGCGATGCAC TGCAAGCTAA AGTGGCAAAC AGTGTTCCCC TTAAGCGTAA TGGTCGTGGC
CAAGACATTG CCAATGCGGC GTTATTTTTA GCCTCAGATA TGGCATCTTA TATTACCGGT
GTGGTGTTAC CCGTGGATGG TGGCTGGGCA TTGGGCGGCG CCAGTATTGC CATGACTGAA
TTAGGTGAGT TAGCAGCCAA GCAAGGGCTA TAA
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| Protein sequence | MFEYTGKNVV VVGGTSGINL QIALSFATAG ANVAVASRNQ DKVDAAVSQL QMANPQGKHF
GVSFDVRDND ALTTGFALIA TNMGQIDVLV SGAAGNFPAS AAKLSPNGFK SVMDIDLLGS
FQVLKQAYPL MARPSGSIIQ ISAPQAYVAM PLQAHVCAAK AGVDMLTRTL ALEWGVEGIR
INSIVPGPIA DTEGFNRLAP SDALQAKVAN SVPLKRNGRG QDIANAALFL ASDMASYITG
VVLPVDGGWA LGGASIAMTE LGELAAKQGL
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