Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1757 |
Symbol | |
ID | 4018235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2078501 |
End bp | 2079196 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637955770 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_562764 |
Protein GI | 91793113 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0566904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCA ACCCAATTTT AGTCGCCCTA GATTTTGATG ATAAAGCCGC TGCACTGCGC TTAATTGACC AGTTAGATCC TAGTCTTTGC CGTTTAAAGG TTGGTAAAGA AATGTTTACC CTGTTTGGTC CTCAGTTAGT GCGTGATATC CATGATCGAG GTTTTGATTT GTTTCTGGAC CTTAAATTTC ATGACATTCC TAATACCGTG GCCAAAGCCG TGAGCGCCGC AGCAGAACTT GGGGTGTGGA TGACTAATGT GCATGCCAGC GGTGGACTTG CCATGATGCA GGCGGCTAAA AAAGCCCTCG AGCCCTATGG CGATAAAGCC CCCTTGTTGA TTGCAGTTAC TGTGCTGACG TCCATGAGTG ATGAAGACTT AGCCTTGCTT GGGATTAATG TGCCCACAGT TGAGCATGTG CTGAGACTTG CAAAACTCAG CCAAGATGCA GGTCTTGATG GCGTAGTATG TTCGGCTCAA GAAGCCAAGC TGCTTAAGCA CAATTTTGGC GCCGATTTTA CCTTAGTGAC CCCAGGTATT CGCCCTGTTG GCAGCGAAAT CGGCGACCAA CACAGAGTGA TGACGCCGCC TCAAGCACTG CAAGCAGGTT CTGATTTTCT GGTGATAGGC AGACCCATTA CTCAGGCAAG CGATCCCTTA GCGGCACTAA AAGCAATCCA TGAATCATTG GTTTAA
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Protein sequence | MNTNPILVAL DFDDKAAALR LIDQLDPSLC RLKVGKEMFT LFGPQLVRDI HDRGFDLFLD LKFHDIPNTV AKAVSAAAEL GVWMTNVHAS GGLAMMQAAK KALEPYGDKA PLLIAVTVLT SMSDEDLALL GINVPTVEHV LRLAKLSQDA GLDGVVCSAQ EAKLLKHNFG ADFTLVTPGI RPVGSEIGDQ HRVMTPPQAL QAGSDFLVIG RPITQASDPL AALKAIHESL V
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