| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1757 |
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| Symbol | |
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| ID | 4018235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2078501 |
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| End bp | 2079196 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955770 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_562764 |
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| Protein GI | 91793113 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0566904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACACCA ACCCAATTTT AGTCGCCCTA GATTTTGATG ATAAAGCCGC TGCACTGCGC
TTAATTGACC AGTTAGATCC TAGTCTTTGC CGTTTAAAGG TTGGTAAAGA AATGTTTACC
CTGTTTGGTC CTCAGTTAGT GCGTGATATC CATGATCGAG GTTTTGATTT GTTTCTGGAC
CTTAAATTTC ATGACATTCC TAATACCGTG GCCAAAGCCG TGAGCGCCGC AGCAGAACTT
GGGGTGTGGA TGACTAATGT GCATGCCAGC GGTGGACTTG CCATGATGCA GGCGGCTAAA
AAAGCCCTCG AGCCCTATGG CGATAAAGCC CCCTTGTTGA TTGCAGTTAC TGTGCTGACG
TCCATGAGTG ATGAAGACTT AGCCTTGCTT GGGATTAATG TGCCCACAGT TGAGCATGTG
CTGAGACTTG CAAAACTCAG CCAAGATGCA GGTCTTGATG GCGTAGTATG TTCGGCTCAA
GAAGCCAAGC TGCTTAAGCA CAATTTTGGC GCCGATTTTA CCTTAGTGAC CCCAGGTATT
CGCCCTGTTG GCAGCGAAAT CGGCGACCAA CACAGAGTGA TGACGCCGCC TCAAGCACTG
CAAGCAGGTT CTGATTTTCT GGTGATAGGC AGACCCATTA CTCAGGCAAG CGATCCCTTA
GCGGCACTAA AAGCAATCCA TGAATCATTG GTTTAA
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| Protein sequence | MNTNPILVAL DFDDKAAALR LIDQLDPSLC RLKVGKEMFT LFGPQLVRDI HDRGFDLFLD
LKFHDIPNTV AKAVSAAAEL GVWMTNVHAS GGLAMMQAAK KALEPYGDKA PLLIAVTVLT
SMSDEDLALL GINVPTVEHV LRLAKLSQDA GLDGVVCSAQ EAKLLKHNFG ADFTLVTPGI
RPVGSEIGDQ HRVMTPPQAL QAGSDFLVIG RPITQASDPL AALKAIHESL V
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