Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1754 |
Symbol | ihfB |
ID | 4018232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2076562 |
End bp | 2076849 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637955767 |
Product | integration host factor subunit beta |
Protein accession | YP_562761 |
Protein GI | 91793110 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000014676 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAT CTGAACTTAT CGAAAAACTC GCCACTAGGC AGTCGCAACT GTCGGCGAAA GAAGTGGAAA GTGCAATCAA AGAAATGTTA GAGCAAATGG CGACAACATT AGAAGGCGGT GATCGAATAG AAATCCGTGG CTTTGGTAGT TTTTCACTTC ATTATCGTGC GCCTCGTACT GGCCGTAACC CAAAAACTGG TACCTCAGTT GAATTGGATG GCAAGTATGT TCCGCACTTT AAGCCCGGTA AAGAACTGCG CGAACGTGTC GATGCGGTTA ATGTTTAA
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Protein sequence | MTKSELIEKL ATRQSQLSAK EVESAIKEML EQMATTLEGG DRIEIRGFGS FSLHYRAPRT GRNPKTGTSV ELDGKYVPHF KPGKELRERV DAVNV
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