| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1745 |
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| Symbol | |
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| ID | 4018223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2065438 |
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| End bp | 2066769 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637955758 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_562752 |
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| Protein GI | 91793101 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000175803 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAAATC TAGGCTTCGA TTTTTCGCCA GATTTCAGAC CCTTGGCCGC CAGAATGCGC
CCAAGGGTAT TAAGTGAATA CATAGGCCAG TCGCACCTGT TAGGTGAGGG TAAGGCGTTG
CGAGTCGCCC TAGAGGCCAA TCGCGCCCAT TCCATGTTGT TGTGGGGGCC GCCCGGCACC
GGCAAGACCA CCTTAGCTGA ACTGATTGCC CATTATGCTA ATGCCCATGT TGAGCGCATT
TCAGCAGTCA GCTCAGGGGT AAAAGACATT CGCGCCGCGA TAGAGCAAGC CAAAGCCGTG
GCCCAAAGCC GTGGTCAACG CACCTTATTA TTTGTCGATG AAGTCCACCG TTTCAATAAA
AGCCAGCAAG ATGCCTTCTT ACCTTATATC GAAGATGGCA CTGTCATTTT TGTGGGCGCA
ACCACTGAAA ACCCCTCATT TGAGCTTAAT AACGCCCTGT TATCCCGTGC GCGTGTGTAT
TTAATTCACA AGTTAACCGA AACCGAAATA ACCGAAATTA TCATTCAAGC CCTTGAAGAC
ACAGAGCGGG GGCTAGGTAA ACGGCAACTG ATCATTCCCC CTGAGGTGAT GGCAGAACTT
ACTCATGTCA GCGATGGCGA CGCGAGAAAG GCGCTTAATT TAATCGAATT AATGAGCGAT
CTCGTTGCCG ATGGTGATGC CGTTAATCTT GAGATGTTAA GTCAAGTGGT GGGCCATAAG
GCCGCGGGTT ATGATAAAAA TGGCGATCAA TTTTATGATT TAATTTCTGC GGTGCATAAA
TCCATTCGCG GCTCGGCTCC CGATGCAGCC CTGTACTGGT TTTGCCGTAT TTTAGAAGGC
GGGGGCGATC CCTTGTATGT TGCCAGGCGC TTACTGGCCA TTGCCTCTGA GGACATAGGT
AACGCCGATC CTGTGGCCAT GACGGTGGCC TTAAATGCTT GGGATTGTTT TCATCGAGTG
GGTCCAGCAG AAGGTGAGCG AGCCATCGCA CAAGCCGTGT TGTATCTTGC CAGTGCCCCC
AAAAGCAACG CTGTGTATAC CGCCTTTAGC GCTGCGAGGG AGCTTGCTCA CGCCACAGGT
CATGAAGCGG TACCGAACCA TTTGCGCAAT GCCCCGACAA AATTAATGAA AACCTTGGCC
GTGGGTGAAG GTTATCGTTA CGCCCATGAT GAGCCAAACG CTTATGCCGC CGGTGAATGC
TACTTACCGC CATCACTCGA AGGGCAGCAA TTTTATCAAC CCACGGAGCG GGGGTTTGAG
AAGCGCATTA AAGAGAAACT TGCGCAGTTA AATCAACTTG ATGGCCATAG CAGGGTCAAA
CGCTATGACT AA
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| Protein sequence | MANLGFDFSP DFRPLAARMR PRVLSEYIGQ SHLLGEGKAL RVALEANRAH SMLLWGPPGT
GKTTLAELIA HYANAHVERI SAVSSGVKDI RAAIEQAKAV AQSRGQRTLL FVDEVHRFNK
SQQDAFLPYI EDGTVIFVGA TTENPSFELN NALLSRARVY LIHKLTETEI TEIIIQALED
TERGLGKRQL IIPPEVMAEL THVSDGDARK ALNLIELMSD LVADGDAVNL EMLSQVVGHK
AAGYDKNGDQ FYDLISAVHK SIRGSAPDAA LYWFCRILEG GGDPLYVARR LLAIASEDIG
NADPVAMTVA LNAWDCFHRV GPAEGERAIA QAVLYLASAP KSNAVYTAFS AARELAHATG
HEAVPNHLRN APTKLMKTLA VGEGYRYAHD EPNAYAAGEC YLPPSLEGQQ FYQPTERGFE
KRIKEKLAQL NQLDGHSRVK RYD
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