| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1735 |
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| Symbol | |
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| ID | 4018213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2049549 |
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| End bp | 2050430 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955748 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_562742 |
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| Protein GI | 91793091 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00310784 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAG GAAGTATCGT AGCCTTAATC ACGCCAATGA ACCGTGATGG CTCAGTAGAT
AATGCTAGCC TTGAGAGGCT AGTTGAGTTT CATATAAATC AGGGCACAGA TGCCATTGTT
GCCGTAGGCA CCACTGGCGA ATCGTCGACC CTGGCTCAGT CAGAACACAT AGCGGTTGTA
GAACAAGTGG TGTCTTTTGC CGCAGGCCGT ATTGCTGTTA TTGCTGGCAA TGGCGCTAAT
GCAACGGCCC ATGGTGTTGA GCTCACTCAA AAGCTCGCCA AAACGGGCGT CGATGCCATG
CTTGGTGTAA CCCCTTATTA CAATAAACCA TCGCCTAAAG GCATAATCGC TCATTACACT
GCGATTGCTA ATAGCACAGA CATAGCGCAA ATTCTTTACA ATGTGCCGGG TCGCACTTGC
CTTGATATGC AGCCAGAGGT TATCGCTGAG CTTGCTAAGG TCAGCAATAT TATCGGGGTA
AAAGAGGCGA CCGGTGACGT GTCTCGCGTG GCAAAACTGC GTGCATTATG CGGCGATGAT
TTTTTACTTT ACAGTGGTGA TGATGCCAGC GCCAAAGACT TTTTACTGCT GGGTGGTGAT
GGGGTCATTT CTGTCGCTAA TAATATAGTG CCCAAAGCAT TTAAAGTCAT GTGCGATGCT
GCCTTAAGTG GTAATGCAGA GCTTGCCAAG ATCCATGACG ACACCCTCAG AGGCCTGTAT
GGTTCTCTTT TTTGTGAAGC CAATCCTATC CCTGTAAAAT GGGCGAGTCA TCAACTAGGA
TTGATTACTA ATGCTTATAT TCGTTTGCCT TTAACTGAAC TTTCAGAGCA GTTTCATGGT
CTGTTGTTAG AAACAATGAA GCAAGCACAG CTTAAGGTCT AA
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| Protein sequence | MLKGSIVALI TPMNRDGSVD NASLERLVEF HINQGTDAIV AVGTTGESST LAQSEHIAVV
EQVVSFAAGR IAVIAGNGAN ATAHGVELTQ KLAKTGVDAM LGVTPYYNKP SPKGIIAHYT
AIANSTDIAQ ILYNVPGRTC LDMQPEVIAE LAKVSNIIGV KEATGDVSRV AKLRALCGDD
FLLYSGDDAS AKDFLLLGGD GVISVANNIV PKAFKVMCDA ALSGNAELAK IHDDTLRGLY
GSLFCEANPI PVKWASHQLG LITNAYIRLP LTELSEQFHG LLLETMKQAQ LKV
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