Gene Sden_1733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1733 
Symbolbcp 
ID4018211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2048381 
End bp2048845 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content43% 
IMG OID637955746 
Productthioredoxin-dependent thiol peroxidase 
Protein accessionYP_562740 
Protein GI91793089 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.1904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACAT TACAAACCGG TCAATCTGCA CCCGCATTCG AACTCAACAA CCAAGATGGA 
CAGCCAGTAG CATTAACGGC CTTATTAGCT CACGGGCCTG TTTTAGTGTA CTTCTACCCT
AAAGCCTCAA CCCCAGGCTG CACGGTACAA GCACAAGGAT TACGTGACAG TTTTGAAGCA
CTTGACGCCA TGAAGGTCAG CGTGGTGGGA ATAAGTCCAG ATCCTGTTGC AAGGCTTAAA
AAGTTTCATG ATAAGCAAGA GCTTAACTTT GACTTACTCA GTGATGAAGA TCACGCCATC
GCCGATGCCT TTGGCGTATG GGGTGAAAAA AAATTTATGG GAAAAATTTA TGATGGCATT
CACAGATTAA GTTTTCTTAT TGGCACAGAT GGCAAAGTCG TTAAACTGTT CGATAAGTTT
AAAACCAAAG ATCATCATCA AGTGGTGCTC GATCATTTGT CGTAA
 
Protein sequence
MNTLQTGQSA PAFELNNQDG QPVALTALLA HGPVLVYFYP KASTPGCTVQ AQGLRDSFEA 
LDAMKVSVVG ISPDPVARLK KFHDKQELNF DLLSDEDHAI ADAFGVWGEK KFMGKIYDGI
HRLSFLIGTD GKVVKLFDKF KTKDHHQVVL DHLS