Gene Sden_1730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1730 
Symbol 
ID4018208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2043725 
End bp2044744 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content42% 
IMG OID637955743 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_562737 
Protein GI91793086 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01036] dihydroorotate dehydrogenase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTACT CGTTAGCACA AAAATTTATG TTTCAAATGG ATGCAGAGCA AGCTCATGAT 
CTTGCAATTA AAAGTTTGAA ATTTACCGCC AATTCTCCCT TGGCTTGCGG TTACAGCCAG
GCGCTACAGT CAAGCCCTGT TAACTGCATG GGAATTACAT TTCCCAATCC CGTGGGTTTG
GCTGCGGGCC TAGATAAAGA CGGTGAAGCG ATAGATGCAT TTCACGCCAT GGGTTTTGGT
TTTGTGGAAG TGGGTACAGT CACGCCTAAG CCACAGGCAG GAAATGATAA ACCTAGATTA
TTTCGGTTAA CTAAGGCGAA AGCCATTATT AATCGAATGG GATTTAATAA TAAAGGCGTG
GATAATCTGG TTAGAAATTT ACAAGCTAAG AAAACCGATA TTTTGGTCGG GGTTAATATA
GGTAAAAATA AAGACACGCC GGTAGAGCAG GGTAAGGATG ATTATTTAAT TTGCATGGAC
AAAGTGTACC CTTATGCAGC CTATATCACG GTTAATATTT CATCGCCTAA TACCCCAGGT
CTTCGAACTA TGCAATATGG GGCATTACTG GATGAATTGC TGGCATCAAT TAAAGCTAAG
CAGGCAGAAC TCGCTGAAAA ATATCATCGC TATGTGCCGG TTGCGCTAAA AATTGCACCA
GATTTAACGG CAGATGAAAT TGAGAGCATA GCCATGAGCT TAATCAGCAA TCAATTCGAT
GCCGTCATAG CCACGAATAC CACTTTGAGC CGCGATGGCG TAGAGGGAAT GACTCATGGC
ACTGAAATGG GTGGCTTAAG TGGTGCGCCG TTAACAGCAG CTTCCACTAT GGTAATAAAG
CAATTGGCCA GTTTCTTAAA TAAAAAGATC CCGATCATAG GTGTGGGTGG TATTAATAGC
GCGCAAGATG CACTAGATAA ATTTGATGCT GGCGCTAATT TAGTGCAGAT ATATTCAGGC
TTTATCTATC AAGGGCCCAA AATAATTAAA GAAATTGTCA ATGCCGTTAA GATGAAATAA
 
Protein sequence
MLYSLAQKFM FQMDAEQAHD LAIKSLKFTA NSPLACGYSQ ALQSSPVNCM GITFPNPVGL 
AAGLDKDGEA IDAFHAMGFG FVEVGTVTPK PQAGNDKPRL FRLTKAKAII NRMGFNNKGV
DNLVRNLQAK KTDILVGVNI GKNKDTPVEQ GKDDYLICMD KVYPYAAYIT VNISSPNTPG
LRTMQYGALL DELLASIKAK QAELAEKYHR YVPVALKIAP DLTADEIESI AMSLISNQFD
AVIATNTTLS RDGVEGMTHG TEMGGLSGAP LTAASTMVIK QLASFLNKKI PIIGVGGINS
AQDALDKFDA GANLVQIYSG FIYQGPKIIK EIVNAVKMK