Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1730 |
Symbol | |
ID | 4018208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2043725 |
End bp | 2044744 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637955743 |
Product | dihydroorotate dehydrogenase 2 |
Protein accession | YP_562737 |
Protein GI | 91793086 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0167] Dihydroorotate dehydrogenase |
TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGTACT CGTTAGCACA AAAATTTATG TTTCAAATGG ATGCAGAGCA AGCTCATGAT CTTGCAATTA AAAGTTTGAA ATTTACCGCC AATTCTCCCT TGGCTTGCGG TTACAGCCAG GCGCTACAGT CAAGCCCTGT TAACTGCATG GGAATTACAT TTCCCAATCC CGTGGGTTTG GCTGCGGGCC TAGATAAAGA CGGTGAAGCG ATAGATGCAT TTCACGCCAT GGGTTTTGGT TTTGTGGAAG TGGGTACAGT CACGCCTAAG CCACAGGCAG GAAATGATAA ACCTAGATTA TTTCGGTTAA CTAAGGCGAA AGCCATTATT AATCGAATGG GATTTAATAA TAAAGGCGTG GATAATCTGG TTAGAAATTT ACAAGCTAAG AAAACCGATA TTTTGGTCGG GGTTAATATA GGTAAAAATA AAGACACGCC GGTAGAGCAG GGTAAGGATG ATTATTTAAT TTGCATGGAC AAAGTGTACC CTTATGCAGC CTATATCACG GTTAATATTT CATCGCCTAA TACCCCAGGT CTTCGAACTA TGCAATATGG GGCATTACTG GATGAATTGC TGGCATCAAT TAAAGCTAAG CAGGCAGAAC TCGCTGAAAA ATATCATCGC TATGTGCCGG TTGCGCTAAA AATTGCACCA GATTTAACGG CAGATGAAAT TGAGAGCATA GCCATGAGCT TAATCAGCAA TCAATTCGAT GCCGTCATAG CCACGAATAC CACTTTGAGC CGCGATGGCG TAGAGGGAAT GACTCATGGC ACTGAAATGG GTGGCTTAAG TGGTGCGCCG TTAACAGCAG CTTCCACTAT GGTAATAAAG CAATTGGCCA GTTTCTTAAA TAAAAAGATC CCGATCATAG GTGTGGGTGG TATTAATAGC GCGCAAGATG CACTAGATAA ATTTGATGCT GGCGCTAATT TAGTGCAGAT ATATTCAGGC TTTATCTATC AAGGGCCCAA AATAATTAAA GAAATTGTCA ATGCCGTTAA GATGAAATAA
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Protein sequence | MLYSLAQKFM FQMDAEQAHD LAIKSLKFTA NSPLACGYSQ ALQSSPVNCM GITFPNPVGL AAGLDKDGEA IDAFHAMGFG FVEVGTVTPK PQAGNDKPRL FRLTKAKAII NRMGFNNKGV DNLVRNLQAK KTDILVGVNI GKNKDTPVEQ GKDDYLICMD KVYPYAAYIT VNISSPNTPG LRTMQYGALL DELLASIKAK QAELAEKYHR YVPVALKIAP DLTADEIESI AMSLISNQFD AVIATNTTLS RDGVEGMTHG TEMGGLSGAP LTAASTMVIK QLASFLNKKI PIIGVGGINS AQDALDKFDA GANLVQIYSG FIYQGPKIIK EIVNAVKMK
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