| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1716 |
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| Symbol | |
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| ID | 4018194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2020283 |
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| End bp | 2022934 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955729 |
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| Product | hypothetical protein |
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| Protein accession | YP_562723 |
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| Protein GI | 91793072 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.122105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACACA TTGAATCACC CAAAGTTGTT AAGAAGAAAC TGTTTTCGCC GATTTGGTTA
CTGCCTATCG TGGCCCTTAT TCTCGGGGGC TGGCTTGGCG TTAAGAGCAT TCGCGAGTCT
GGGATTGAAA TCCAAATTCA TTTCCCTAGT GCCACTGGCA TAGACGTAGG AAAAACCTTA
GTAAAATATC AAGGTCTTAC TGTGGGTAAA GTGAGTGACA TCAGCATAGA TGACGATCTC
AAAGGGGTGA ATGTCAAAGT GTTGATGGAT TATCGCGCCG ATCCCTTTCT GCGTAAAGAC
ACCCTATTTT GGCTGGTGAC ACCCAAAGCC AGTATCACAG GGGTTGAAGG CCTAGATGCT
CTGTTCTCTG GTAATTATAT TGCCCTGCAA CCAGGCAGTG GTCGCTCTGC CACTCAGTTT
GAAGCCGAAC GTGAAACCCC GAGCATTCTC CCCAGCAGTG AAGGTTTAGT GATTGAGTTA
ACCAGTAAGA AGCTTGGCTC TGTCGATGTG GGCTCCCAAG TGTTTTACCA TCAAATTCCG
GTTGGCAGTG TGGTGAGTTA TCGCCTCGAG AACAGTCAGC TCATCGTTAT CAGCGTGTTT
ATTCAGGAGC AATATGCACA GCTTGTCAAA AAGAACTCAC GCTTTTGGAA CGTCTCAGGG
CTTTCTATCG ACGCCTCCCT TTCTGGCATA AAAATCAACA CTGAGAGCCT TGCCTCCCTG
CTGGCAGGTG GAATAAGTTT TGACTCAGAA GAAGATCAAG ATATAGCCGA GAATGGTGAC
AGTTTCTTGC TATTTGCCGA TGAAGCCCAA GCATTAACCG GTCATAGATT CACTCTTACC
GCCAAGGATG CGGAAAATGT TGGCAAAGGG GCCGCCATTA TTTATCGCGG CATCACAGTC
GGCACTGTAA TAGATAAAAA ACTCAGCGAT ACTGGGGTGA TTTTAACCGC TGAACTCAAT
GCTGAGCATC AAGCCCTGCT TAGCAGTGAT AGCCGTTTCT GGCTTTCTGG AGCTGAAATT
TCTTTGTCAG GAGTTAAGCA TGCGGCACGT TTAATCACAG GTAATGTGGT CAATATTCTC
CCCGGCGCCT CACAAGACCG CACTAAAAAC AGCTTCGCAC TTGAAACCAA TGCGCCTGAT
TTACTCTGGG CAAAAAAGCG TTTTATTACC GTGACAGCTA AAGAAAATAA TGGCGTAAAA
GCCGGCTCTC AAATTCGTTT TAGGCAGTTG CCCATAGGAC AAGTCAACCA AGTGTCTCTG
AGTAAAAACT TTGAGCAAGT CGAGTATCAA GTTGAAATTT TACCTGAATT TTCTTCATTG
TTAACCCAAG GCAGTTATTT CATCCCCGAG TCAGCCGTTA AAATCAGTGC CTCTTTAGAG
GGTATTGAAG TGCAAACCCG AGATTTAGCC ACCTTAGTAG AAGGCGCCAT CAGCCTTATT
CCGGGGAAAA GCAAACAGCT AACAAAACAG AGTCAATTTC ACTTGTTTGC ATCCCAAGCT
GCGGCGCAGC AAGAACAAGA TAAAGCCAAT AAAGTCCACC TAACCCTCTT AAGTCACGAT
GGCGCTGACT TAAGTGCTGG CGCGCCCGTT TACTATAAGA AAATGGCCAT AGGCGAAGTG
GAAAGCATCA CTTGGCAAGC CGCCAGCGAC ACCTTTGCGG TAAAACTGGC TATCGACAAA
CAATTTAATG CCTTACTTAA ACCCAATCGG GTATTTTGGC GCAATCAAGC CGTGTCTGTG
GATGCAAGCC TTGCGGGAGT TGAGTTTGAT ATTGCGCCAC TGGCTGGCGC CATCAAGGGC
AGCATTAGTT TAGGCTTTGT GGCTAATCAA GAGGCTCTAC CTCAGGCCGA AATAGCCCAA
GCTGAAATCT TATATGAAGA CCGCCATCTG GCATTAGTGC AAGCCAAAGC CATCAGCCTA
ACCTTGTCCG CCACGGCTAA CATCAATGCT AAAGCCGCCA TTCGCTTTCA AGGACATCAA
ATCGGTCAAG TGCAGAGTGT TAAACTCAGT CCAAGTCTCA ATGAGTTAAC GGCTAAGGCC
TATTTATACG GTGAATACGC GCAACATTTT AGTCGCAGCG ACAGCGAGTA CTATATTGTC
GATGCGCAAA TTTCCTTAGT GGGGATCAAG GCACCACAAA CCCTCATTAC CGGGGCCTAC
CTTGCCGTAT CACCCGGTAT TAACACAGAT GAAGCCCAAC ACTTCAAGGT GCACAATCAA
GCCAGTCACT ATGCAAATCT TGCCGAGGAT GCGCTGACCT TCACCTTAGA AGACACTAAA
TTAGGTTCGT TAAAGGCGGG GACTCAAATT TTCTATCGCG GCATCCCTAT TGGTCAAATA
GATGGTTATC AGCTCAATGA AACCGGTAAT AAGGTACAAC TGTTTGCTCA CATTCAGGGG
CAGTACGCAC ACCTTGTCAA TCAAACGAGT CTGTTTTGGA ATACCTCTGG TATTAAGATA
GACGTGGGTT TATTTTCAGG CGCGCAAATT GAAACGGGAT CATTAGAGTC CATACTGGCT
GGGGGGATAG GCGTCGTGAC TCAAGAAGTG ACTCAGGAAA GCAATACCCT TATCTCGGGC
AGCACCCTGC CAATTCAACA AGATTTCGAT CCACAATGGC TCACTTGGGA GCCGGCGCAA
CAAGCCCGTT AA
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| Protein sequence | MTHIESPKVV KKKLFSPIWL LPIVALILGG WLGVKSIRES GIEIQIHFPS ATGIDVGKTL
VKYQGLTVGK VSDISIDDDL KGVNVKVLMD YRADPFLRKD TLFWLVTPKA SITGVEGLDA
LFSGNYIALQ PGSGRSATQF EAERETPSIL PSSEGLVIEL TSKKLGSVDV GSQVFYHQIP
VGSVVSYRLE NSQLIVISVF IQEQYAQLVK KNSRFWNVSG LSIDASLSGI KINTESLASL
LAGGISFDSE EDQDIAENGD SFLLFADEAQ ALTGHRFTLT AKDAENVGKG AAIIYRGITV
GTVIDKKLSD TGVILTAELN AEHQALLSSD SRFWLSGAEI SLSGVKHAAR LITGNVVNIL
PGASQDRTKN SFALETNAPD LLWAKKRFIT VTAKENNGVK AGSQIRFRQL PIGQVNQVSL
SKNFEQVEYQ VEILPEFSSL LTQGSYFIPE SAVKISASLE GIEVQTRDLA TLVEGAISLI
PGKSKQLTKQ SQFHLFASQA AAQQEQDKAN KVHLTLLSHD GADLSAGAPV YYKKMAIGEV
ESITWQAASD TFAVKLAIDK QFNALLKPNR VFWRNQAVSV DASLAGVEFD IAPLAGAIKG
SISLGFVANQ EALPQAEIAQ AEILYEDRHL ALVQAKAISL TLSATANINA KAAIRFQGHQ
IGQVQSVKLS PSLNELTAKA YLYGEYAQHF SRSDSEYYIV DAQISLVGIK APQTLITGAY
LAVSPGINTD EAQHFKVHNQ ASHYANLAED ALTFTLEDTK LGSLKAGTQI FYRGIPIGQI
DGYQLNETGN KVQLFAHIQG QYAHLVNQTS LFWNTSGIKI DVGLFSGAQI ETGSLESILA
GGIGVVTQEV TQESNTLISG STLPIQQDFD PQWLTWEPAQ QAR
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