Gene Sden_1715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1715 
Symbol 
ID4018193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2019031 
End bp2020200 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content48% 
IMG OID637955728 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_562722 
Protein GI91793071 
COG category[C] Energy production and conversion 
COG ID[COG1979] Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.131652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAATT TTAATTATCG CAATCCTACC CATGTTGTTT TCGGTAAAGA CCGAATGGCA 
GAACTCGATC AATTAGTGCC TGAAAATGCG AGGGTATTAA TCACCTACGG CGGCGGCAGT
GTGCAACGTT TTGGCACCTT AGATAAAGTC AAAGCTGCAT TAGGTAATCG AACCGTATTT
GAATTTGGCG GTATTGAAGC TAATCCTAAA TACGATACTT TGATGAAAGC CGTTGAAGTC
GCACGGGCTG AAAAAATAGA CTTTTTATTG GCAGTAGGCG GCGGCTCTGT GATGGATGGG
ACTAAATTTA TCGCCTTGGC AATAACGTTT ACCGGTGACA CAGCAAGCCT ATTACACCAT
GGATTCAATC CAGTGCCAGT GGCCAATGAT AAGGTTATTC CACTTGGGGT TATCGCCACG
CTGCCGGCAA CAGGATCAGA AATGAATGCC TTTGCGGTAG TGAGCTATCA AGGGGGTAAG
TACCCCATGA ATCACCCCAA TGTGTACCCA ACATTTGCTA TGCTTGACCC TGAGTTAACC
TTTAGCTTGC CAAAAATTCA AGTGGCCAAT GGGGTTGTGG ATGCGTTTGT CCATGTGCTC
GAGCAGTATG CCACTTATCC TGTGGATGCT CGGGTGCAAG ATCGCATGGC CGAAGGCATT
ATGCGTACCC TTATCGAAAT TGGTCCCATC ACGGTTGCAG AACCAACCAA CTATGATGCC
CGCGCAAACT TAATGTGGAG CGCGACATCG GCCCTAAACG GCATGATAGG CACAGGCGTG
CCCATGGATT GGACCACTCA CATGATAGGA CACGAGCTGA CGGCCTTATT TAATATTGAT
CATGCTCAAA CCTTAGCCGC TGTGTTGCCC TCGGTATGGC GAGTGTTAGC CACGCAAAAG
CAGGCTAAAT TGCTGCAATT CGCTGAGCGT GTGTGGGACA TTACTGCCGA TGAGGGAGAT
GAAGCCTATC GTGTTGAGCA GGCCATAGCG AAAACAGAAG CTTTCTTCCA GCAAGTTGGC
TTGCCTACAC GCCTTCGTGA TCATGGAGTG ACGGTAGCGC AAATTGATGC TGTGATTGAT
GCATTAGCAG CCCATGGCAT GACAGCCTTG TCTGAAACCG GCAAGGTAGA CTTAGCCGCT
AGCCGTCAAA TTTTAGAGAT GGCGTGGTAA
 
Protein sequence
MLNFNYRNPT HVVFGKDRMA ELDQLVPENA RVLITYGGGS VQRFGTLDKV KAALGNRTVF 
EFGGIEANPK YDTLMKAVEV ARAEKIDFLL AVGGGSVMDG TKFIALAITF TGDTASLLHH
GFNPVPVAND KVIPLGVIAT LPATGSEMNA FAVVSYQGGK YPMNHPNVYP TFAMLDPELT
FSLPKIQVAN GVVDAFVHVL EQYATYPVDA RVQDRMAEGI MRTLIEIGPI TVAEPTNYDA
RANLMWSATS ALNGMIGTGV PMDWTTHMIG HELTALFNID HAQTLAAVLP SVWRVLATQK
QAKLLQFAER VWDITADEGD EAYRVEQAIA KTEAFFQQVG LPTRLRDHGV TVAQIDAVID
ALAAHGMTAL SETGKVDLAA SRQILEMAW