| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1714 |
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| Symbol | |
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| ID | 4018192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2017930 |
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| End bp | 2018799 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637955727 |
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| Product | AraC-type transcriptional regulator-like protein |
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| Protein accession | YP_562721 |
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| Protein GI | 91793070 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00197834 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAA TAGCACGGTT AATGGCTCAA TTAGCGCCCC ATGAAGGCGT GAATAAAACC
CACTTAGCAG GAGTGAATAT CTTTAAAAGC GCTAAATATG GCTCCCGTGG ACCCATGTGT
TATTCACAGG GAGTATTGTT TGTGGGTCAA GGCAAGAAGC GCGTTTATCT TGATAATCAA
AGCTTTGATT ATGACAGGCA GCATTCATTG GTGATGACAG TGCCCCTGCC CGTCGAGTGT
GAAACCTTTG CCAGTGAAGC TGAGCCGGTA TTGGTCTTGA TGCTGGATAT TGATTTAGTG
CAACTCAATT ACATTATACG TTTAATGGAT GAGCACAATA AAATCCCCAA AGATATCAAT
GAGTCACGCC AGAGCGGCTT TTTTGTGGCT GAAAACACAG CAGACATGGA TTGCAGCCTG
TTAAGGCTGT TACAAGCTCT GCAATCCCCA CTGGAAGCCA GTATTATGGG CAGCGCCCTA
GTACTTGAAC TCTTGTATCG ATTGTTAGAT GCCCCCAATG CGAGTCCTTT ATATGCCCTT
TCATTAAGCC ATACCCGACT TTCACGAGTT GAAAAGGCAC TGAGCTACAT ACATAAACAT
TATGGTGAGT CCGTTGAAGT CGACACCCTA GCAGGACTTG TGAACATGAG CCCATCAGCC
TTTCATCGCT GCTTTAAAGA AGTCACCGCA TCATCGCCAA TACAATATTT AAAAAAAATT
CGCCTAAACA AAGCCAAAGA ATTACTGCAA TTGCAACAAC TGAAAGTGAA ACAGGTTTCA
ACTCAAGTCG GCTATGAAAG CACAGCCCAA TTTAGCCGAG AGTTTAAGCG CTATTTCAAC
CAAAGCCCAG GCGAATGTGC ACGCCAATAA
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| Protein sequence | MSEIARLMAQ LAPHEGVNKT HLAGVNIFKS AKYGSRGPMC YSQGVLFVGQ GKKRVYLDNQ
SFDYDRQHSL VMTVPLPVEC ETFASEAEPV LVLMLDIDLV QLNYIIRLMD EHNKIPKDIN
ESRQSGFFVA ENTADMDCSL LRLLQALQSP LEASIMGSAL VLELLYRLLD APNASPLYAL
SLSHTRLSRV EKALSYIHKH YGESVEVDTL AGLVNMSPSA FHRCFKEVTA SSPIQYLKKI
RLNKAKELLQ LQQLKVKQVS TQVGYESTAQ FSREFKRYFN QSPGECARQ
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