Gene Sden_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1712 
Symbol 
ID4018190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2016052 
End bp2016615 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content45% 
IMG OID637955725 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_562719 
Protein GI91793068 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000896279 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAT TATCTACAAC TCGATTCGAA TTGACATTAA TGACCCTGGA AGAGAAAGCC 
CTGTTGTTTG AATTAGATCA AGACCCCGCC GTGATGGAAT TCATTAATGG TGGTAAGCCA
ACGTCTATGG TGGATATAGA AGAAAAGTTT ATTCCACGGC TCGCATGCTA CATAAACCCC
GATAAAGGCT GGGGCCTGTG GAAGGTAGTA GGAAAAGACT GCATAGAGAA TCAAGGTAAT
AGTTTAGCCG GAGTGTTTCT AGGCTGGATT TTAGTGCGGC CGATGGGATT TTTCACCGAC
AGTCCGCGTT TTGATGATAT AGAGCTGGGT TGGCGCTTTA AGCAAGTATC ATGGGGCAAG
GGCGTGGCCA CAGAAGCAGC CAGTGCCGTG GTAAACTATT TAACGACTCA GGATCAGGTT
AACTCTGTTT CTGCTATTGC GGTGGAAGAA AACCTAGGTT CCATCAAGGT GATGAAAAAG
TTAGGTATGA CTTTCGTGAA AAAAGCCCCA GAACCTGAAG GACACACAGA TACTGAAGTG
GTGTTTTATC AACGTGCGCT TTGA
 
Protein sequence
MRKLSTTRFE LTLMTLEEKA LLFELDQDPA VMEFINGGKP TSMVDIEEKF IPRLACYINP 
DKGWGLWKVV GKDCIENQGN SLAGVFLGWI LVRPMGFFTD SPRFDDIELG WRFKQVSWGK
GVATEAASAV VNYLTTQDQV NSVSAIAVEE NLGSIKVMKK LGMTFVKKAP EPEGHTDTEV
VFYQRAL