| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1708 |
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| Symbol | rplT |
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| ID | 4018186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2009732 |
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| End bp | 2010088 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637955721 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_562715 |
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| Protein GI | 91793064 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0547661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTAGAG TTAAGCGTGG TGTAACCGCT CGTGCTCGTC ACAAGAAAGT ACTTAAACTA
GCTAAAGGTT ATTATGGCGC ACGTAGCCGT ACTTACCGTG TTGCTGTTCA AGCAGTAACT
AAAGCTGGTC AATATGCTTA CCGTGACCGT CGTCAGAAGA AACGTCAATT CCGTCAACTG
TGGATTGCAC GTATCAATGC AGCGGCTCGT CAAAATGGTC TGTCTTACAG CCGTTTCATC
AACGGTCTGA AGAAAGCGTC TATCGAAATC GATCGTAAGA TTTTGGCTGA CATCGCTGTT
TTCGACAAAG TTGTATTTGC AACGTTAGTT GAAAAAGCAA AAGAAGCATT AAACTAA
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| Protein sequence | MPRVKRGVTA RARHKKVLKL AKGYYGARSR TYRVAVQAVT KAGQYAYRDR RQKKRQFRQL
WIARINAAAR QNGLSYSRFI NGLKKASIEI DRKILADIAV FDKVVFATLV EKAKEALN
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