| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1683 |
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| Symbol | |
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| ID | 4018159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1959526 |
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| End bp | 1964505 |
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| Gene Length | 4980 bp |
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| Protein Length | 1659 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637955694 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_562690 |
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| Protein GI | 91793039 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAGC ATTCAAGCTT CAAACAGGCA TTATTATTTG GCGGACTGGT GTTTACCTTG
GGCCTAGCGA TAAGCTTGGC GACTTCCCTG TGGGTTCACG ATAAAAACCA GCGGTTTATT
ACTCAAGCCT TAGAAGAAAA TACTCAAGAC ATCAGCCAGC GTGTGATCGA GCGAGTCACC
TTGTACCAAT ATGGGCTTCG CAGTGCCAGA GGCTCAATAT TAACCGCTGG CGAGCAAGGG
ATTTCCCGAG AAATATTTAA AGGCTACAGT GACACTCGTG ATATCGACAT TGAATTTCCA
GGAGCTAGGG GCTTTGGCTT TATTCGCCGG GTTAAACCTA TTGATGAGGC CAGCTTTATC
GCCAAAGTCA AGCACGCCGG CTGGCCTGAT TTTTCTATCC GTCAATTGAC CCCCCACGAT
AATGAACGTT TCGTGATTGA ATTGGTTGAG CCAGTAGAGC GAAATATGGC TGCCATAGGT
TTGGATATCG CCTCTGAGAC CAATCGTTAT CAGGCTGCTT ATCAAGCATT ATTATCCGGC
AAAGTGCACC TGAGTGGTCC CATTACCTTA GTGCAAGCCA CAGGAAATCC ACAGCAATCT
TTTTTAATTT TATTGCCCAT ATACAGGACG GGAAATATTC CTGAGACTGT CAAGTTAAGG
AAGGCTGAAG GGTTTGGCTG GAGTTATGCG CCACTTGTGA TTGATGAAGT GCTTGAAGAT
CTTAATTTAA CCCAAGAGAC CACTAAGCTT GAGCTTAAAG ATGTTACCGA CAACAGCAAC
CCTGTGCTTT TCTATCAAAC TCACGCTTTC GATACTGCTA AGTTATCTCG ATATAGCACC
ACGCTTTCGA CAAATATTTT TGGCCGCCAA TGGACCATTT CAGTTTCCGC TTACCCCGTA
TTCATTGAAA GTTTACACTT AACTCGTCCA AGTTTAGTGC TGGCCTATGG TTTATTGATG
AGCTTGCTCT TTGCAGTGTT AATGGCATTT TATAGCCGTA ACAAGCAACA AAAGCGTCTG
CTGGATGCTG AAAATGCCAG GCGTGCCAAT ATACTCGAAC ATTCTTTAGA TGCCATCATA
AGTTATGACA GCGAAGGGCT AATCACTGGC TGGAATCAAG GGGCTGAACA CATTTTTGGC
TATACCAAAG ACGAAGTGAT GCAAGGGGCA AACCTGGGTT TGATAGTACC CGCCGCAAAC
AAAGAAATTG AATGGACGCA GTTCAAGCAA GTGTTATCTG GTGAGGCGAT TCAAAATGCC
GTCGGTGTTC ATCACGATAA AGAGCAAAAC AAATTATCGA CCTCTATGAC AGCACTGCCC
ATTTATAACC ACGTCGGGGT GATTGTCGGC GTGAGCCAAA CCATAAGGGA TATCACCGCC
GCGCAAGATG CCGAGCGGCA AATTCATGAA CTCAATGCCA GTCTCGAACG TAAAGTCCAC
CTAAGAACCC AAGCCTTAGA GCATGTGGTC GCCGAAAACA AAACCTTATT TGACACCATA
GACCAACAGC TCTTGTATTC AGAAATCGAC TTACAAGGCA TTATTTTGGC AGTGAATGAT
AATTTTTGCG AGGCTAGCGG CTATAGCCGT GAGCAGCTGG TGGGCCTGAG CCATTTACAG
GTCAGCTCAG GTGAACACGA TAAGTTATTT TGGCAACGTT TGTGGAACAA GATTAAATCT
GGCAAGCCTT GGCACGGTGA AATTTGTACC TTAGACAGCA AGGGGGAGCC TAAGTGGTTT
GATACCGTGA TAGCGCCGAT TTTTGATAAA CAAAAAAATA TCGAGCGCTT TGTGTCATTA
GCCACAGACA TTACCGAACG CAAGAACGCT CAATTAGAGA AAAACAAAGT GGGTGCCTTA
TTATCCAATG TGCTTTTTGC CGCCTCTGAA GTTGCAATAA TTGCCACGGA TGAAACAGGG
ATTATCAGCA TATTTAATCG CGGCGCCGAG CGGCTACTGG GCTACCACAG AGATGAGTTG
GTGGGTAAAA TTAGCCCAGC GATATTTCAT TTAACCCAAG AGGTAATGTT AAGGGGCGAT
GAATTAAGTG CAGAACACGG CATCGAAATT CGTGGTTTTG AGGCCTTCAT TTATCATGCT
AAACACAAGG GACCCGAAAC CCGTCGCTGG ACGTATGTGC GAAAAGATGG CAGTGAATGC
CAAGTGTCCT TGTCCGTGTC AGCCATGCGA GATACACAAG GCAATCTTTT AGGCTATCTT
GGGGTTGCCA CCAATATTGA CTTGATGCTC AAACAGCAAG AGGAGCTGGT CTCTACCAGT
ACTCAACTGA CACAAGCGGC AGAAGTTGCA GAACTTGGTA TTTGGACCTG GGAGATAGAA
ACCAATATTT TAGATTGGAA TGAACGTATG TTTGCTATCT ATGATTATCC GAGTTCGCTT
AATCATAACG GTTTATCTTA CCAACACTGG CTCGATAGAT TGCATCCCGA TGATGTAGAT
ATGGCCCAAG AGAAACTCAA GGCTGCCATT GAAGGCACGG GAGAATATGA TCCCATATTC
AGAGTGATAC GGCCTTCAGA TGAAGTACGT TATGTTCAAG GTGGCGCCCA TGTTATTCGA
GATAGGTTTG GTAAGGCACT GAAGTTGCTT GGGATAAACC GTGATATTAC TGAACAGCGG
GAATTAGAAC ACACCCTAAG AAGGGCTAAA GAAGAGGCCG ATGCCACCAG TGCCGCTAAG
TCTGCCTTCT TGGCCAATAT GAGTCACGAA ATTCGAACCC CTATGAATGC CATTCTGGGC
ATGTTGCAGC TAGTGCAGCA CACTGACATG ACGCCACAGC AACAAGACTA TGTGTCAAAA
ACCGAAGTGG CGGCGCAATC CTTATTGGGC CTCTTAAATG ATATTTTAGA TTTTTCTAAA
ATAGATGCTG GCAAACTGAA TGTGGATCTC CATCCCTGCT CCCTGGAAGA AATTATGCGA
GAGCTTGCGG TGCTCTTGGC TGCCAATATG CGCAGAAAAC ACATTGAAGT GTTATTCGAT
TTAGATCCCA GTATTCCAGA ACTCGTGTTG GCGGATAAAC AAAGATTACA ACAAGTGTTG
CTCAATCTTG CGGGCAATGC GATTAAATTC ACTGCTCAAG GACATGTCAT ACTACAAGTG
TTCAATTTGA AGCTCAGTAG CCATAAGGTG CGGTTAAGGA TAAGTGTGGC TGACACTGGC
ATAGGCATCA ATGTGAGTCA GCTTGATAAG ATATTTCAAG GTTTTATGCA GGCGGAATCG
TCCACCTCAC GGCGTTTTGG CGGCACAGGC CTCGGCCTTG CGATTACTAA GCGCTTGGTG
GAGTTAATGG GGGCTGAGCT TGAAGTTGAA AGCCAAGAGG GACAGGGCAG CCGTTTCTGG
TTCGATATAG AATTTGAATT AGTCGAGACT CCTATCACTA AGTCGACATT AACCTTAAAC
AATCGCCGGG TGCTCTTGGT TGATGACAGC GCAATGAGCC GAAAAATTGT GGCCAACACA
TTAGTCACTC ATGGCGCCGA GGTGGTTGAA GCCAGTGGGG GCTTGGAGGC ATTAACTCTG
ATTGAACAGA GTCTTGAGGA AGAAAAAGCC TTTGATGCGG TAGTGATGGA TTGGCGCATG
CCAGAACTTA ATGGCTTAGA AGCGGCTGAG CGCATCCATG AATTGTGTGG TCACAAGCCA
AGACCCGCAG TTATCATGCT TACCGCTTAC GCTGAAGATT TGATGCTAGA AAGTAAAGCT
TACTCGAGCT TACCTTTTGT CAGCTTACTC ACTAAACCCA CCACAGCGAA CCTTATTCTT
GAAACCTTAG ATAACGCCAT CATGGGTAAA GTTGAAAGAG GTTCAACCAA AAAATGGGCT
CAGGACAACT TGCAGGGCTT GTCTATCTTA GTGGTGGAAG ACAATGCATT AAATCGCCAG
GTTATCGATG AGCTACTTAA ATTACAAGGT GCGATAGTCA CCCTAGCTGA GGGTGGAATT
GAAGGGGTTA AGCAAGTCAC TGATCAAGGA ATGGATTTTG ATATTGTGAT CATGGACATG
CAAATGCCTG ACATCGACGG CTTAGAAGCC ACACGGTTAA TCCGCGCCGA TGGCCGCTTT
GAACACTTGC CCATTCTTGC CATGACGGCC AATGCATCGG CCATCGACAG AGAAAACTGT
CTCAGGGCTG GAATGAATGA TCATATTGGT AAACCCGTGG ACATGAGTGA ACTTGTGCCG
CGCATATTAA CACTCACTCG AGATGAATAC TCAATCTCAG GCAATAACAG CCTTGCTAAT
TCCCACTCTG CCGATAACAA TCCAGCTAAT AACAACTCTG CTAATATCAG TGCAGAGCAA
GACAGGCTAG CTACTGAGAG TATTTCCACT GAAAGAGTCA TGCCACAGGA TGTGGCCATA
CTGGAAGATA CCAGTTCTAT TTTGCGTAGA TTTGGTGGTG AGATGTCGTT TTTCATCGAC
GTGAAACAAA GCTTTGTGTC TGAAATGATG TTACAGCTTG GCTTGTTAAC GACAGCATTT
GAACAAGCCG ATTTACAGAC CGCCAGCATA GTCGCCCATA CCATTAAAGG CACGGCAAGC
AACTTAGGGG CTAAGCGGTT AGCAGCCTTC GGCGCACAGT TAGAGCTTGA GTGTAAACAA
GGGCTTGAAC CATTAGCCGC CAAGCAATGG CTGTTGACCA TAGAGCAAAG TATAACTGAT
AGTGCCTTAC ACTTGGATAA GCTATTTTTA TCTACGACGA GTGATGAGCA GGTTGAAGAG
AAAAAGAGGC CTTTGATTAA TGGCGAACAC AATGATCAAT TCGATAGAAA AATGCTTAAA
GAATTAATAC TCTTGTTAGA AGAACAAAAC TTGGATGCGT TCGATAAACT AAGCCACATA
CTCGAGAACC TAGTCTCAGA GGGGCATTGG CTTACCTTAG AGACCCAAGT GAATAACTTA
CAGTTTAACG ATGCGCTAGT AACGGCTGAA GCCATTTTGA AAGGGGCAGA AACGTGTTAA
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| Protein sequence | MTQHSSFKQA LLFGGLVFTL GLAISLATSL WVHDKNQRFI TQALEENTQD ISQRVIERVT
LYQYGLRSAR GSILTAGEQG ISREIFKGYS DTRDIDIEFP GARGFGFIRR VKPIDEASFI
AKVKHAGWPD FSIRQLTPHD NERFVIELVE PVERNMAAIG LDIASETNRY QAAYQALLSG
KVHLSGPITL VQATGNPQQS FLILLPIYRT GNIPETVKLR KAEGFGWSYA PLVIDEVLED
LNLTQETTKL ELKDVTDNSN PVLFYQTHAF DTAKLSRYST TLSTNIFGRQ WTISVSAYPV
FIESLHLTRP SLVLAYGLLM SLLFAVLMAF YSRNKQQKRL LDAENARRAN ILEHSLDAII
SYDSEGLITG WNQGAEHIFG YTKDEVMQGA NLGLIVPAAN KEIEWTQFKQ VLSGEAIQNA
VGVHHDKEQN KLSTSMTALP IYNHVGVIVG VSQTIRDITA AQDAERQIHE LNASLERKVH
LRTQALEHVV AENKTLFDTI DQQLLYSEID LQGIILAVND NFCEASGYSR EQLVGLSHLQ
VSSGEHDKLF WQRLWNKIKS GKPWHGEICT LDSKGEPKWF DTVIAPIFDK QKNIERFVSL
ATDITERKNA QLEKNKVGAL LSNVLFAASE VAIIATDETG IISIFNRGAE RLLGYHRDEL
VGKISPAIFH LTQEVMLRGD ELSAEHGIEI RGFEAFIYHA KHKGPETRRW TYVRKDGSEC
QVSLSVSAMR DTQGNLLGYL GVATNIDLML KQQEELVSTS TQLTQAAEVA ELGIWTWEIE
TNILDWNERM FAIYDYPSSL NHNGLSYQHW LDRLHPDDVD MAQEKLKAAI EGTGEYDPIF
RVIRPSDEVR YVQGGAHVIR DRFGKALKLL GINRDITEQR ELEHTLRRAK EEADATSAAK
SAFLANMSHE IRTPMNAILG MLQLVQHTDM TPQQQDYVSK TEVAAQSLLG LLNDILDFSK
IDAGKLNVDL HPCSLEEIMR ELAVLLAANM RRKHIEVLFD LDPSIPELVL ADKQRLQQVL
LNLAGNAIKF TAQGHVILQV FNLKLSSHKV RLRISVADTG IGINVSQLDK IFQGFMQAES
STSRRFGGTG LGLAITKRLV ELMGAELEVE SQEGQGSRFW FDIEFELVET PITKSTLTLN
NRRVLLVDDS AMSRKIVANT LVTHGAEVVE ASGGLEALTL IEQSLEEEKA FDAVVMDWRM
PELNGLEAAE RIHELCGHKP RPAVIMLTAY AEDLMLESKA YSSLPFVSLL TKPTTANLIL
ETLDNAIMGK VERGSTKKWA QDNLQGLSIL VVEDNALNRQ VIDELLKLQG AIVTLAEGGI
EGVKQVTDQG MDFDIVIMDM QMPDIDGLEA TRLIRADGRF EHLPILAMTA NASAIDRENC
LRAGMNDHIG KPVDMSELVP RILTLTRDEY SISGNNSLAN SHSADNNPAN NNSANISAEQ
DRLATESIST ERVMPQDVAI LEDTSSILRR FGGEMSFFID VKQSFVSEMM LQLGLLTTAF
EQADLQTASI VAHTIKGTAS NLGAKRLAAF GAQLELECKQ GLEPLAAKQW LLTIEQSITD
SALHLDKLFL STTSDEQVEE KKRPLINGEH NDQFDRKMLK ELILLLEEQN LDAFDKLSHI
LENLVSEGHW LTLETQVNNL QFNDALVTAE AILKGAETC
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