| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1679 |
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| Symbol | |
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| ID | 4018155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1953232 |
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| End bp | 1954266 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955690 |
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| Product | dihydroorotase |
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| Protein accession | YP_562686 |
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| Protein GI | 91793035 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0418] Dihydroorotase |
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| TIGRFAM ID | [TIGR00856] dihydroorotase, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.279559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGTT TAACCATAAC TAGGCCAGAT GATTGGCATG TCCACCTCAG GGATGGCATT
CAGCTTAACG ATACGGTGCG AGACATTAGC CGTTATATGG GCCGCGCTAT CATTATGCCT
AACCTTATGC CCCCCGCGAC GTGTACCGAT ACCGCGCTGG CTTATCGCGA GCGTATTGTT
GCCGCTAAAA CGCCGGATAA TCAGTTTGAA CCTTTAATGG TGCTTTATTT AACGGATAAC
ACTAGCCCAG ATGAAATTCG TAAAGCTAAG GCTACTGGGC TTATTCATGC GGCTAAGTTG
TATCCTGCGG GGGCGACCAC CAATTCAGAT TCTGGGGTGA CCAGCATCAG CAACTTATAC
CCAGTGCTTG AAGCCATGGC TGAAGTGGGT ATGTTGTTGC TAGTTCATGG CGAAGTAACG
GATTCAAGTA TCGATATTTT CGATCGTGAG AAAGTGTTTT TAGAGACCAT TCTGGCCCAA
GTGGTGACAG ATTTCCCTAA GCTTAAAATA GTGCTTGAGC ACATTACTAC CTCAGATGCT
GTGGAGTTCG TCAATAAAGC ACCGGACAAT GTGGCAGCGA CCATCACCGC TCATCATTTA
CTCTATAACC GTAACCATAT GCTAGCGGGT GGTATTAGGC CTCATTTCTA TTGTTTGCCC
ATTCTTAAGC GCAATACCCA TCAGCAGGCG TTAATTGCCG CAGCCACCAG TGGCAGCAAA
AAATTCTTCC TTGGCACGGA TTCTGCTCCC CACCTTAAAG ACAAAAAAGA AGCCTCCTGT
GGTTGTGCAG GCTCTTACAC GGCCCACGCA GCCATTGAGC TATATGCCGA AGCGTTTGAA
GCCGCGGGCG CCTTAGATAA ACTCGAAGCC TTTGCCAGTT TTTATGGTGC CGATTTTTAT
GGTTTACCCC GTAATACAGA CACCATTACC CTAGAAAAAA CCCCATGGCA AGTGCCAGAC
TCTTACCCCT TAGCCAACGA CAGGGTGGTG CCTATTCGCG CCGGTGAAAT GCTGGATTGG
CAAGTCATAA GCTGA
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| Protein sequence | MMSLTITRPD DWHVHLRDGI QLNDTVRDIS RYMGRAIIMP NLMPPATCTD TALAYRERIV
AAKTPDNQFE PLMVLYLTDN TSPDEIRKAK ATGLIHAAKL YPAGATTNSD SGVTSISNLY
PVLEAMAEVG MLLLVHGEVT DSSIDIFDRE KVFLETILAQ VVTDFPKLKI VLEHITTSDA
VEFVNKAPDN VAATITAHHL LYNRNHMLAG GIRPHFYCLP ILKRNTHQQA LIAAATSGSK
KFFLGTDSAP HLKDKKEASC GCAGSYTAHA AIELYAEAFE AAGALDKLEA FASFYGADFY
GLPRNTDTIT LEKTPWQVPD SYPLANDRVV PIRAGEMLDW QVIS
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