Gene Sden_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1669 
Symbol 
ID4018145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp1940279 
End bp1941229 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content49% 
IMG OID637955680 
Product1,4-dihydroxy-2-naphthoate octaprenyltransferase 
Protein accessionYP_562676 
Protein GI91793025 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 
TIGRFAM ID[TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.000418378 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGCGC CACAGATTAG TATTAGCCTA GAAAACGGAT TTATGACTCA AGACACCACA 
GATATATCAC AAACTCGCGC TTGGCTAATG GCCATCAGGC CACGCACACT CCCCGCCGTC 
CTTGGGCCGC TTATAGTAGG CAATGCCCTT GCCTTAGGTG TTGAAGGTTT TAGTCTACTC 
ACAGCTTTGG TCATCATCAG CTGTGGTCTA TTGCTGCAAA TATCGGTAAA TCTTGCCAAC 
GATTACTTCG ATAGTTTATC CGGTGTCGAT TCTCAGGAAC GCCTTGGCCC CATAAGAATG 
ACACAAGCTG GACTTATTTC GGCTAAACAA ATGAAAAAGG CCATGATTAT GAGCCTTATC 
TGTGCATTGT TAGTGGGCGT ATATTTAATT GATATCGGCG GCTGGCCCAT TGGCTTATTA 
GCTGCGGCCA GCTTGTTAGC CGTCATTTGC TACAGCGGCG GCCCTTACCC ACTCGCGTCC 
CATGGCCTTG GCGAATTAAC GGTATTTATT TTCTTTGGCT TAGTGGCGGT TGTCGGCAGC 
GTTTATTTGC AAACTGGCGC CACAAGTCAA GAAGCCTGGC TCTTGGGCGC AGCCATTGGC 
TCACTCAACG CCGCCATTAT GCTGGTCAAT AATGTCCGCG ATATTAACAC TGACGCAAAA 
GCCCATAAAC GCACCTTAGC GGTACGCTTG GGTCAAGGCC AAGCAAGGGT ATTTTATCAA 
ACCTTAGTGT ATCTGCCTTA CGGCATTATC ATAAGCGCGT TTTTACTGGG TTTTTTACCC 
GGTTTTGCCG TGGGCTTATC TGGCCTCAGC CTAGTGTACG CCCGCAGCCT CAGTAGGCAA 
TTCCATGAAT TAAGCGGCGC GGAACTCAAC CCCATATTGG CCCAGACCGC TCTGCTGTCC 
TTAGTCTTTA GCTTGCTCTT CAGCCTAGGC TGGTACTTAG GTTTATCCTA A
 
Protein sequence
MLAPQISISL ENGFMTQDTT DISQTRAWLM AIRPRTLPAV LGPLIVGNAL ALGVEGFSLL 
TALVIISCGL LLQISVNLAN DYFDSLSGVD SQERLGPIRM TQAGLISAKQ MKKAMIMSLI 
CALLVGVYLI DIGGWPIGLL AAASLLAVIC YSGGPYPLAS HGLGELTVFI FFGLVAVVGS 
VYLQTGATSQ EAWLLGAAIG SLNAAIMLVN NVRDINTDAK AHKRTLAVRL GQGQARVFYQ 
TLVYLPYGII ISAFLLGFLP GFAVGLSGLS LVYARSLSRQ FHELSGAELN PILAQTALLS 
LVFSLLFSLG WYLGLS