| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1666 |
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| Symbol | |
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| ID | 4018142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1934776 |
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| End bp | 1937379 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637955677 |
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| Product | aconitate hydratase |
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| Protein accession | YP_562673 |
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| Protein GI | 91793022 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCGT CATACCGCAA GCCGTTACCC GGCACTAAGT TAGATTTTTT TGATACACGT
GAGGCAGTCG ACGCCATTTC TCCCGGCGCA TTCGCCACTC TGCCTTATTG CTCCCGCGTG
TATGCCGAAA ACTTAGTGCG CCGCTGCCCA CCCGAGGCAT TGGAAGCTTC ACTGAAACAA
ATTATTGAAC GCAAACGTGA CTTGGACTTT CCCTGGTTTC CTGCACGGGT TGTGTGTCAT
GACATTCTTG GCCAAACCGC ACTGGTAGAT TTAGCCGGCC TTAGAGATGC CATAGCCGAG
AAAGGCGGCG ACCCATCAAA GGTTAACCCT GTGGTGCCTA CTCAGCTTAT CGTGGATCAT
TCTTTAGCCG TGGAACACGC GGGTTTTGAA ACCGATGCCT TTGAGAAAAA CCGCGCCATC
GAAGACAGAC GCAACGATGA TAGATTCCAT TTCATCAACT GGACCAAAAC CGCCTTTAAA
AATGTCGATG TTATTCAGCC CGGCAACGGC ATCATGCATC AAATTAACTT AGAGCGCATG
TCGCCTGTGG TCCATGCCCG TGATGGCGTG GCATTCCCTG ATACCTTAGT GGGCACCGAC
AGCCACACGC CTCACGTGGA TGCGCTTGGC GTTATCGCTA TCGGTGTTGG CGGCCTAGAA
GCGGAAAGTG TGATGCTTGG ACGCGCTTCT TACATGCGCC TGCCAGACAT TATCGGGGTA
GAGCTCACCG GTAAGCCGCA AGCAGGGATC ACGGCAACAG ACATAGTGCT GGCATTGACC
GAATATTTGC GTGCGCAAAA AGTCGTGTCC TCTTATTTAG AATTTTTTGG CGAAGGTGCA
GCCCACCTCA CATTAGGGGA CAGAGCCACT ATTTCTAACA TGACCCCTGA ATATGGCGCC
ACTGCTGCCA TGTTCTATAT TGACCAGCAA ACAATTGATT ATCTTAAGTT AACAGGCCGT
GATGACGAGC AAGTTAAATT GGTTGAAACC TATGCTAAGC ACACAGGTCT TTGGGCTGAT
AGCCTAACAA CGGCTGTGTA TGAGCGTAAC TTAAGCTTTG ATTTATCCAG TGTTGGCCGC
AATATCGCCG GTCCCTCAAA CCCTCATGCA CGGGTGGCCA CTAAAGATTT AGCCGCTAAG
GGCATATCTG GCATAGTTGA AAATGAGCCA GGCAAGATGC CAGATGGCGC TGTGATCATC
GCCGCTATCA CCAGCTGCAC CAACACAAGT AACCCAAGAA ACGTGATTGC AGCAGCGCTT
TTGGCTCGTA ATGCCAATGC CGCTGGCTTA AGCCGTAAGC CATGGGTGAA AACCTCACTG
GCCCCAGGCT CTAAAGCGGT GCAGCTGTAT TTAGAAGACT CGAACCTCTT GACCGAGCTT
GAGCAATTAG GCTTTGGTAT TGTCGGCTTT GCTTGCACTA CATGTAATGG TATGAGCGGC
GCCCTTGACC CAGTTATTCA ACAAGAAGTC ATTGAGCGCG ATCTTTACAC CACAGCTGTG
CTGTCTGGTA ACCGTAACTT CGATGGCCGT ATTCACCCCT ATGCTAAGCA AGCCTTCTTG
GCATCTCCCC CTTTAGTGGT GGCTTATGCC ATCGCTGGCA CCATACGTTT TGATATCGAA
AAAGACGTGC TGGGATTGGA TAAAAACGGC AATGCCGTGA CCTTGAAAGA TTTATGGCCA
TCGGATGAAG AAATCGATGC TGTGATTGCG AAAAGCGTAA AACCTGAGCA ATTCCGTAAA
GTGTATGAGC CCATGTTCGA TTTGAAAGTC GAATACGGCA GCCACATCAA TCCTCAGTAT
GACTGGCGCC CTCAAAGCAC TTATATTCGC CGCCCGCCTT ATTGGGAAGG TGCACTAGCA
GGCGAGCGAG CCATGAAAGG CATGCGCCCC TTGGCCGTGC TTGGGGATAA CATCACCACA
GATCACTTAT CGCCATCAAA CGCCATTTTG CTCGACAGCG CCGCCGGTGA ATACCTGCAT
AAAATGGGAC TGCCTGAGGA AGATTTTAAC TCCTATGCCA CCCACAGGGG CGATCATTTA
ACTGCCCAGC GCGCCACCTT TGCGAACCCT AAACTCTTTA ATGAAATGGT GAGCGAAATC
GGCAAAGACG GCGGCGTTAA GATAAAACAG GGCTCTTATG CTCGCATCGA GCCTGAAGGT
CAAGTGACCC GCATGTGGGA AGCGATTGAA GCTTATATGG AGCGTAAACA GCCGCTTATT
ATTGTTGCTG GCGCCGACTA CGGCCAAGGC TCGTCTCGAG ATTGGGCGGC CAAAGGGGTA
CGCCTAGCTG GGGTTGAAGT GATTGTCGCC GAAGGCTTTG AGCGCATTCA TCGCACTAAC
TTAGTGGGCA TGGGTGTGTT ACCCCTTGAA TTTGTCAATG GTGATAATCG CCATACTTAT
CAGATTGATG GCACAGAAAC CTATGATGTT CTTGGGGATC GCACCCCAGG CGGCATGATG
ACACTTATCA TCAACAGGAA AGACGGTCAG TCGGTATCTG TACCAGTGAA GTGTCGCCTC
GATACCGAGG AAGAGCTGTC TATCTATGAA GCGGGCGGCG TGCTGCAACG CTTTGCTCAA
GACTTCTTAG CAGGCAATGC TTAA
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| Protein sequence | MNSSYRKPLP GTKLDFFDTR EAVDAISPGA FATLPYCSRV YAENLVRRCP PEALEASLKQ
IIERKRDLDF PWFPARVVCH DILGQTALVD LAGLRDAIAE KGGDPSKVNP VVPTQLIVDH
SLAVEHAGFE TDAFEKNRAI EDRRNDDRFH FINWTKTAFK NVDVIQPGNG IMHQINLERM
SPVVHARDGV AFPDTLVGTD SHTPHVDALG VIAIGVGGLE AESVMLGRAS YMRLPDIIGV
ELTGKPQAGI TATDIVLALT EYLRAQKVVS SYLEFFGEGA AHLTLGDRAT ISNMTPEYGA
TAAMFYIDQQ TIDYLKLTGR DDEQVKLVET YAKHTGLWAD SLTTAVYERN LSFDLSSVGR
NIAGPSNPHA RVATKDLAAK GISGIVENEP GKMPDGAVII AAITSCTNTS NPRNVIAAAL
LARNANAAGL SRKPWVKTSL APGSKAVQLY LEDSNLLTEL EQLGFGIVGF ACTTCNGMSG
ALDPVIQQEV IERDLYTTAV LSGNRNFDGR IHPYAKQAFL ASPPLVVAYA IAGTIRFDIE
KDVLGLDKNG NAVTLKDLWP SDEEIDAVIA KSVKPEQFRK VYEPMFDLKV EYGSHINPQY
DWRPQSTYIR RPPYWEGALA GERAMKGMRP LAVLGDNITT DHLSPSNAIL LDSAAGEYLH
KMGLPEEDFN SYATHRGDHL TAQRATFANP KLFNEMVSEI GKDGGVKIKQ GSYARIEPEG
QVTRMWEAIE AYMERKQPLI IVAGADYGQG SSRDWAAKGV RLAGVEVIVA EGFERIHRTN
LVGMGVLPLE FVNGDNRHTY QIDGTETYDV LGDRTPGGMM TLIINRKDGQ SVSVPVKCRL
DTEEELSIYE AGGVLQRFAQ DFLAGNA
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