Gene Sden_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1660 
Symbol 
ID4018136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1928274 
End bp1929203 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content48% 
IMG OID637955671 
Productmethyltransferase type 11 
Protein accessionYP_562667 
Protein GI91793016 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTAA AGCAGGGGGC TGCGTCTATG GTTGATTCAG TAGCTCATTT ACAAGCAGAT 
GTAGAAGCTA ACTCTAATTC ACAAGCCTGT TCAGAGGCTT TGCCCCATAT TGAGCGTTTT
TCAAAGGCCG CTAAGCAATA TAAGCGGCAC GATGTGTTGC AGCGATTAAC CGCAGCTCGC
TTGCAAAAAA ACGCGAATTT ATCTGGCTGT TTGTTGGATG TGGGCGCGGG CCCTGGGACC
TGCTTTGCGG CATTTAGCGG TATCAAACAA GTCACTGCCT TGGATATCGC CCAAGGCATG
CTAGATACCT TGAGTCTTAG GTTTAAGGAC TATCGCACTG TGTGCTGCGA TGTGCAGCAA
ATAAAACTTG ATGATGAGGT TGTTGACACC ATTTATTCAA ACTTAGCATT GCAGTGGTGC
ACGGATTTGC CTAGGGCGGC GGCTGAGCTG GCTCGTGTAT CGGTTCGCGG CGCCGAATGT
CACCTGAGCA TAGTGGCGGC AGGCAGTTTG CCAGAACTTA AGACGTTAGG TTTTAGAACA
AATAGCTTCA TGAACTTAGC TGAAATGATT GACGCTTTTC TTGGCATTAA TCAAACAGAA
AACGCTCAAG TTAATCAAGC CCAACCCCGT GGTTTACCTC AAAAGACTTG GCAGCTGTTG
GATGCAAGCC TTGAACACAC GCAAGTCTAT TTCAATGATT TACGCAGCAT GCTGTATTCC
ATTAAAGGGG TAGGTGCATC GGCCCAAAGT CAATCTGTGA TTCACGCACA ACCAAAGACA
GCTAAAGCAT CGGCATTGGC GTTAAGCTCC ACACAGCTTA TGTCTAAAAG CCAATGGCAG
CATAGGCGTA AACTTGCTGA AACCATGCGC ACGGAACAAG GCTTACCTCT GACTTACCAG
ATTGCCTACC TTAGGCTTAA GCTAGCCTAG
 
Protein sequence
MTVKQGAASM VDSVAHLQAD VEANSNSQAC SEALPHIERF SKAAKQYKRH DVLQRLTAAR 
LQKNANLSGC LLDVGAGPGT CFAAFSGIKQ VTALDIAQGM LDTLSLRFKD YRTVCCDVQQ
IKLDDEVVDT IYSNLALQWC TDLPRAAAEL ARVSVRGAEC HLSIVAAGSL PELKTLGFRT
NSFMNLAEMI DAFLGINQTE NAQVNQAQPR GLPQKTWQLL DASLEHTQVY FNDLRSMLYS
IKGVGASAQS QSVIHAQPKT AKASALALSS TQLMSKSQWQ HRRKLAETMR TEQGLPLTYQ
IAYLRLKLA