Gene Sden_1657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1657 
Symbol 
ID4018133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1924427 
End bp1925776 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content52% 
IMG OID637955668 
Productadenosylmethionine-8-amino-7-oxononanoate aminotransferase 
Protein accessionYP_562664 
Protein GI91793013 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID[TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACT CTAAAGCCAG TGATCTCAAA CTCGACCTTG CCTTCGACAG CACCCATATC 
TGGCACCCTT ATACTTCGAT GGCCTCTCCC CTGCCGGTTC AAGCCGTGGT CAGTGGTCAA
GGCTGCGAGC TAACCTTAGC AGATGGCACT GTGCTCATCG ATGGCACTAG CTCTTGGTGG
GCCTGCGTGC ATGGCTATGG TCACCCCGAA ATTCTCGCGG CCATGGAGCA GCAATTGCAT
ACTCTCAGTC ATGTGATGTT TGGCGGTATC ACTCATAAGC CGGCTATCGA TGTCGCCAAG
CTGCTGATTG AAATGACAAG CCCAGCCCTA AGTAAGGTAT TTCTCGCCGA TTCTGGATCC
ATTGCCGTGG AAGTTGCCAT AAAGATGGCG CTGCAATATT GGCAAGGGCG AAATAATAAA
GACAAACAGT GCATTTTGAC GGTGAAATCC GGCTACCACG GTGATACCTT CGCCGCCATG
AGTGTCTGCG ATCCCGACGG TGGCATGCAT ACCATGTTTG GCGCCAATGT CACCAGCCAG
CTGTTTATGC CGGCGCCAAG ATTGGGTTTT GATGCCCCCT TTAGCCTTGA GGATGAACAA
GCCTTAAGGG CGCAGTTTGA GCAACACCAC GCCCAAGTCG CTGCCGTGAT CATTGAGCCG
ATAATGCAAG GGGCTGGCGG CATGCGCTTC TATTCCCCTG CCTACTTAAG GGCGCTGCGT
AAACTATGCA CTCAATTCGA TGTGTTACTG ATTTTAGATG AAATTGCCAC AGGGTTTGGC
CGTACCGGTA AGTTATTTGC CTATGAGCAT GCCAATATTC AAGCCGATAT TCTCTGTCTA
GGTAAAGCCT TAACCGGGGG GTATATTAGC CTTGCAGCGA CCCTATGCAC GGATGAGGTC
GCCCAAGGGA TCAGTGACTC ACCTGCTGGG GTATTTATGC ACGGCCCCAC CTTTATGGGT
AATCCTCTGG CCTGCGCCGC GGCGGCGGCA AGCTTAACAC TTATCAAGCA AAACCACTGG
CCCAAGCAAG TCGCCGCCAT TGAAGCCCAG CTCAAACTCG AGCTTGCCGG TGCCATCGAA
TTTGCACAAG TCAAAGACGT ACGAGTATTA GGTGCCGTTG GGGTGATAGA AATGAATCAT
CAAGTCAATA CCGCCAAGCT GCAACAGTCT TTCGTGGACT TAGGCGTCTG GGTGCGCCCC
TTCAGTAACC TGATTTACAT CATGCCGCCC TACAGCATCA GTTCAGCGCA ATTAAGCCAA
TTGACCCAGG CTATGAAACA AGTGGCTGCC AGTATTAGCA ACGAGAATAA CCAGAGTGAA
AACGAGCCAA GCTTTATCAG CCATGGTTAA
 
Protein sequence
MNNSKASDLK LDLAFDSTHI WHPYTSMASP LPVQAVVSGQ GCELTLADGT VLIDGTSSWW 
ACVHGYGHPE ILAAMEQQLH TLSHVMFGGI THKPAIDVAK LLIEMTSPAL SKVFLADSGS
IAVEVAIKMA LQYWQGRNNK DKQCILTVKS GYHGDTFAAM SVCDPDGGMH TMFGANVTSQ
LFMPAPRLGF DAPFSLEDEQ ALRAQFEQHH AQVAAVIIEP IMQGAGGMRF YSPAYLRALR
KLCTQFDVLL ILDEIATGFG RTGKLFAYEH ANIQADILCL GKALTGGYIS LAATLCTDEV
AQGISDSPAG VFMHGPTFMG NPLACAAAAA SLTLIKQNHW PKQVAAIEAQ LKLELAGAIE
FAQVKDVRVL GAVGVIEMNH QVNTAKLQQS FVDLGVWVRP FSNLIYIMPP YSISSAQLSQ
LTQAMKQVAA SISNENNQSE NEPSFISHG