| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1650 |
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| Symbol | fumC |
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| ID | 4018125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1914964 |
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| End bp | 1916352 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955660 |
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| Product | fumarate hydratase |
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| Protein accession | YP_562657 |
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| Protein GI | 91793006 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0114] Fumarase |
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| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATGA GTCAATTTAG AGTCGAGTCA GATAGCATGG GCGAGGTTAG TGTGCCTAAA
AAGGCGCTCT ATGGCGCGCA AACACAAAGG GCGCTGGATA ACTTTCAGTT CAGTGGCTTG
GTGATGCCTA AGGCATTTAT TGAGTCTCTG GCATTAATAA AGCAGACAGC GGCCGAAACT
AATGCTCAGT TGGGACTGTT AGACAGCCAA CGTTGTGAGG CGATAGTGGC CGCAAGCCAA
GCCATTATTG ATGGGAAACA CCTCACAGAG TTTCCTGTCG ATGTGTTTCA AACTGGCTCG
GGCACCAGCA CAAACATGAA TGCCAACGAG GTAATTGCCA GATTGGCTGC GCAATTATCT
GGACTTACTA TATCGGCGAA CGATCATGTC AATATGAGTC AAAGCAGTAA TGATGTGATC
CCCACTTGTA TTCACTTGAG CGCAGCTCTG GCCATATCCA AGCAATTATT GCCGGCGCTT
GAACACCTCA CCTCACTATT AGAACAAAAA GCCGTCACCT TGCAGGGCTT AGTCAAAACC
GGTCGCACCC ACCTGATGGA TGCCATGCCA GTGAGCATGT CTCAAGTAAT ATTGGGTTGG
GCATGGCAAG TAAAACAATC CCAGCAAAGA TTAACTCATG GATTACAACA ATTATTGAGT
TTGGCTCAGG GGGGGACTGC GGTTGGCACT GGCGTCAATG CTCACGAGGA TTTCTCCGCG
CGTTTTTGCA CTGTGCTCAG CGCTAAAACC GGGGTTAAGT TTGCGCAAAG TCAGAATTTA
TTTTGCGCTA TCGGCAGCCA AGATATCGCC GTCAGCGTGT CTGGTGAATT GAAAGGCTGC
GCCGTGAGTT TGACAAAAAT CGCTAATGAC TTGCGCTGGA TGAATTCTGG CCCCTTGGCA
GGCTTAGGGG AAATTGCTTT ACCTGAGTTG CAACCTGGCT CGTCCATCAT GCCTGGCAAA
GTGAATCCGG TTATTCCAGA AGCTGTGGCC ATGATAGCCG CTCAAGTCAT AGGCAATGAC
ACTTGTATTA CCATAGCCGG GCAATCTTCA AATTTTGAAC TCAATGTCAT GTTGCCTGTC
ATTGCTTACA ACCTTCTGCA GAGCATTGAG CTCTTAAGCA ACGCAAGTGT CGCTTTAGCA
GATAAAGCCA TCCTAGGCTT TACTGTGAAT GAGCACAGGC TTAAACAGGC CTTAAGTCTT
AACCCCATTC TAGTCACTGC CCTCAATCCC ATCATAGGCT ATGAAAATGC CGCTAAAATC
GCTAAAAAAG CTTATGAACA GCATAGGCCC ATTATAGATG TAGCCGAAGA AGAAACTAAT
CTGGATAGGG CCAGTCTTGA GGCCATACTC GACCCTTATA AACTCACCCA AGGCGGGATA
GCCAAGTAA
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| Protein sequence | MSMSQFRVES DSMGEVSVPK KALYGAQTQR ALDNFQFSGL VMPKAFIESL ALIKQTAAET
NAQLGLLDSQ RCEAIVAASQ AIIDGKHLTE FPVDVFQTGS GTSTNMNANE VIARLAAQLS
GLTISANDHV NMSQSSNDVI PTCIHLSAAL AISKQLLPAL EHLTSLLEQK AVTLQGLVKT
GRTHLMDAMP VSMSQVILGW AWQVKQSQQR LTHGLQQLLS LAQGGTAVGT GVNAHEDFSA
RFCTVLSAKT GVKFAQSQNL FCAIGSQDIA VSVSGELKGC AVSLTKIAND LRWMNSGPLA
GLGEIALPEL QPGSSIMPGK VNPVIPEAVA MIAAQVIGND TCITIAGQSS NFELNVMLPV
IAYNLLQSIE LLSNASVALA DKAILGFTVN EHRLKQALSL NPILVTALNP IIGYENAAKI
AKKAYEQHRP IIDVAEEETN LDRASLEAIL DPYKLTQGGI AK
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