| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1647 |
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| Symbol | |
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| ID | 4018122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1911761 |
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| End bp | 1913233 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955657 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_562654 |
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| Protein GI | 91793003 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGTAATA TTAGATTATC TAAGATTTCC ACTGGCATTA TTCTCGGGGC CGCGTCGATA
TTATTCAGCG CAGGCATAGC CAAAAGCTTT GCTAGCAGTG ACCTTCCCGA TCTCGGCACC
GCAGCCGTTA ACACCTTAAG TTTAGAAAAA GAAATGATTT TTGGTGATGC CTATATGCGC
GTCATTCGCT CTTCGGCGCC CATGCTTAAC GATCCCGTGC TAAATCAATA TTTGTCTGAA
CTTGGCAATA AGTTGGTGGC CCATGCCACA GGGGTCAAGA CCCCATTTTA CTTTTTTCTC
CTCAATAACG ATGAAATCAA CGCCTTCGCC TTCTTTGGCG GCCATGTTGG CGTCCATACT
GGGCTGTTTC TTAATGCGGA TTACGAGAGT GAATTAGCTT CTGTTTTGGC CCACGAAGTA
ACCCACGTTA CCCAGCGTCA TTTAGCCCGT TCATTTGAAG CTCAGCAAAA AGCCACGCCA
GCGACCGTAG GCGGCATGTT AGGGGCAATA TTATTGACCA TAGCGGCGCC CCAAATAGGC
ATTGCAGCCC TTGCCACCAC TCAAGCGTTA GCCACACAGG CCAGAATAAA CTACACACGT
TCAAATGAAA AAGAAGCCGA CCGCATCGGT ACTCAAACCT TAGTTGATGC CGGTTTTGAC
CCGAATGGCG CGGCAGATTT CTTTGGTAAA ATTGCCCTTC GCTACCGCTT TACCACTAAA
CCGCCGCAGA TGTTGCTCAC CCACCCTCTA CCTGAATCTC GGATAACAGA AGCTCGTAAC
CGCGCGACGC AATACCCAAA ACGCTATATT CCCGACAGCC TTAATTTTCA TCTTGCTAAG
GCGAGGATCC AAGTCCGTTA CTCATCTTTT AGCGATGATT CAGCCTTGGC ACTCTTTGAA
ACTCAGTTAA AGAAACAAGA TTATAGTTTC AAAGCCGCAG CGCTTTACGG TAAAGCCTTG
GCCCTGTATC GCCTCGAAAA ATTACCTGAA GCTGAAGTCA TCATCAATGA ATTGTTAGCC
CTAGATGGTC AAAACCTTTT TTACTTAGAT GCTAAAACAG ATTTATTGAT CGAGCGTAAG
GCGTTTACGG ATGCCATAAG TTTACTCGAG GCGCAGCGCA AACTTAAACC CAGCTCTCAA
GTTATCAATG CCAACTTAGC CAATACTTAT ATACAAGCCG AACAAGCCCA TAAGGCCATA
CCCATTTTAG AAGAGCTTAT TTTCTTCGAT AAAAAGAGCC AGCTCCCTTA TCAGCTATTG
ACTGAGGCGT ATAACAAGTT AGGTAATAAA GCCATGGAGC ATTATGCCAA TGCCGAATCC
ATGGCATTAA TGGCCAATTA TCGCGGCGCT ATCGACCAAC TGAATTATGC TTATCGCTAC
TCGGAAGGTC AGAGTTTGCA AATTGCCCGT ATCGAAGCGC GCATTAGGCA ATTTAGAATA
GCTGAAAGGG ATCTTGAAGC CTTGCAGCGC TAA
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| Protein sequence | MRNIRLSKIS TGIILGAASI LFSAGIAKSF ASSDLPDLGT AAVNTLSLEK EMIFGDAYMR
VIRSSAPMLN DPVLNQYLSE LGNKLVAHAT GVKTPFYFFL LNNDEINAFA FFGGHVGVHT
GLFLNADYES ELASVLAHEV THVTQRHLAR SFEAQQKATP ATVGGMLGAI LLTIAAPQIG
IAALATTQAL ATQARINYTR SNEKEADRIG TQTLVDAGFD PNGAADFFGK IALRYRFTTK
PPQMLLTHPL PESRITEARN RATQYPKRYI PDSLNFHLAK ARIQVRYSSF SDDSALALFE
TQLKKQDYSF KAAALYGKAL ALYRLEKLPE AEVIINELLA LDGQNLFYLD AKTDLLIERK
AFTDAISLLE AQRKLKPSSQ VINANLANTY IQAEQAHKAI PILEELIFFD KKSQLPYQLL
TEAYNKLGNK AMEHYANAES MALMANYRGA IDQLNYAYRY SEGQSLQIAR IEARIRQFRI
AERDLEALQR
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