Gene Sden_1644 details

Gene Information

• Locus tag: Sden_1644
• ID: 4018119
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 1908771
• End bp: 1910759
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637955654
• Product: hypothetical protein
• Protein accession: YP_562651
• Protein GI: 91793000

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATATAC AATATAAGCG GGTTTTAGCC GGCAGCCTTT GCTGCATGAC ACTATTAAGT 
GCTTGTGGTG GAGGCGGTTC AGATGGAACA GCCCCAGTCG CCCCGCCTGT TATCACGCCG 
CCCACGACCC TGCCGCCAGT CAGTAGCTGC ACTGCGAGCA ATCAGCTTCA AACTGTCACC 
ACAGGGACAG ATTTAAGCTT CATGATTGAA AGTCATTATC AAGTCGGCCA ATCGGCCATG 
ATACTGGCAA AGCTTACTAA CCGTAATACT GCAGGGCTAC GTTTTAGCTG GCAGCAAACT 
GCGGGGCCAG CCCTTGCATT GGCCAGCGTC AACAGCCCCC TATTAGCCTT TGATCTCATT 
GAGGCGGGCA GTTATGAGTT TACCCTAACC ACCCAAGTTC AAAGTACTAA TCAACAGTTC 
GCCAGCGCAG CAGTGCAAAT TAATGTGGAT GCTAGTCAGA GCAATCAACT CAATGTTCGC 
TTAGATCATC AAGTGGTTGA AAATAATGAT ATTAGTCTAA GGCTTGGGCG CAAAAACAAC 
CAGGCTATCG GCAATATTAG CTGGTGTCAG GCAAGTGGCC CCACTGTCAG CCTTAATCTT 
GATGACAAGG AAAAACCCCT CTTTACGGCG CCTAACGTCA ACCAAGACGA AGTCATTCAT 
TTAATCGCCA GTGGTGAGTT TGGCGGAGAA AGCTTAACCG ATGACGTATA CCTACTTGCC 
ACCCAAGAGA GCAGTATAAG CTCGAGCTAT TTCGACACGC CTGTTGCGCG AACTCACAGT 
TATACTCAGT CAAGCTACAG TCAAATATTG ACGGGCTGCG TCTATTCCAA TCAGTTGGTC 
AATGCCTGTA ACGTAATGAC TCGCTTGCCA CTGATAGGTC AGGTGAGTCC CAATGCCAGC 
CGCGCTGCCA TCATGGACAG AGTGGTGGTG TCTCACGATT GGATGGGCAA GAACTTTGAA 
GCTTTCTTAA CCCAAGTGGA CATGAATAGC GACTTTGCCA AATTGCTGCA GTCTGTCACT 
GCTATCGTCA TCAGCTATGA TATTAGGCCA TCTTTCTACT GGGTAGTGAC CGGTGCCATC 
TATTTGGATC CTGAAAACCT CTGGCTCACC CCAGCTCAGC GAGACACCAT TAATGAAGCC 
GCCGATTATC GCAGCGATTT TGGTAAAGAA CTCAACTTTT TAATGCCTTG GCGCTATGTG 
AAAAATAACC AATACGCCAG TCAATCCTTT GCTAAAACTC AGCGCCAACC TCGCACGATT 
GCCGATCTGA CGCCGAGCCT AGCATCGCTG TTATATCATG AACTGGCCCA TGCCAATGAC 
TTCTTCCCAC GCAGCGTACA TAGTAATATT CAAGGCCCAA CCCTACTGGA CGATTTTAGC 
CGTAGAAATA ATGCCAAGGC GTTGATTTCA GACCAATTAA GTGCAAACTT TCCGCTATTA 
AGCCAACAGA TGTATGCCTT GGCAAAGGTA AGTTTTAAGG GCGACACGGC TACCAGCCTA 
GATAAAAGCT ATCAATCAAG CGATGTGGCA AGTTTCTTCG CTCCAGACAA GGCCAACGAT 
TATTATGCCT ATACTTCAAC CCGAGAAGAT GCCGCCATGT TATTTGAAGA AGCCATGATG 
AGCTATCGTT TGGGCATAAG GCGTGATGTG GCTGTGACAG ACAAGCCAGC CAATGCCAGC 
GCAGACACCA TAGTAGTAGC CTTTGGACAA CGGGGCCGTA TCGCAGATCC AAGCATAAAA 
AGTCGAGTCA GTTATGTTTT AGATAATATG ATGCCAGAGC TCAATAGCCA GACTGTACTT 
GCTGCCCTCC CCCCGGTGCA GCAGATGACA GTTGGCCAGA GCTGGGCTGC AAACTTGAGT 
CTAAGCAATC CCAGCCCTGC AAATGCCAAG GCAGCTAAAA CAAGTGCTGA CGCTCAACAG 
CCATTAACTG AAAGGGTGAA TAACATGCCG CTTCAGCTCA GCGGCGATCA CCACGGTAAA 
GCCCAATAA 

 

Protein sequence

MDIQYKRVLA GSLCCMTLLS ACGGGGSDGT APVAPPVITP PTTLPPVSSC TASNQLQTVT 
TGTDLSFMIE SHYQVGQSAM ILAKLTNRNT AGLRFSWQQT AGPALALASV NSPLLAFDLI 
EAGSYEFTLT TQVQSTNQQF ASAAVQINVD ASQSNQLNVR LDHQVVENND ISLRLGRKNN 
QAIGNISWCQ ASGPTVSLNL DDKEKPLFTA PNVNQDEVIH LIASGEFGGE SLTDDVYLLA 
TQESSISSSY FDTPVARTHS YTQSSYSQIL TGCVYSNQLV NACNVMTRLP LIGQVSPNAS 
RAAIMDRVVV SHDWMGKNFE AFLTQVDMNS DFAKLLQSVT AIVISYDIRP SFYWVVTGAI 
YLDPENLWLT PAQRDTINEA ADYRSDFGKE LNFLMPWRYV KNNQYASQSF AKTQRQPRTI 
ADLTPSLASL LYHELAHAND FFPRSVHSNI QGPTLLDDFS RRNNAKALIS DQLSANFPLL 
SQQMYALAKV SFKGDTATSL DKSYQSSDVA SFFAPDKAND YYAYTSTRED AAMLFEEAMM 
SYRLGIRRDV AVTDKPANAS ADTIVVAFGQ RGRIADPSIK SRVSYVLDNM MPELNSQTVL 
AALPPVQQMT VGQSWAANLS LSNPSPANAK AAKTSADAQQ PLTERVNNMP LQLSGDHHGK 
AQ