Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1643 |
Symbol | |
ID | 4018118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1907992 |
End bp | 1908702 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637955653 |
Product | DNA replication initiation factor |
Protein accession | YP_562650 |
Protein GI | 91792999 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR03420] DnaA regulatory inactivator Hda |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.112989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCAAA ACTCACCGAG ACAGTTATCT TTACCCGTCT ATTTACCTGA CGATGAAACT TTTCAGAGTT ATTACCCGGC CTCGGGTAAT GATGAACTGA TCCAAAAGTT GCAAGCCAGT GCGCAAGGGG GATTAAGTTC TTCCTTGTAT ATTTACGGAC CGGTAAAGTC CGGCCGCACG CATCTGATGC ACGCCGCCTG TGCGTTAGCG AACGATAAAG ACAGGCGTAC CTTGTATATT CCCCTCGGGA TCCACGCCAG TATTTCACCG GCGTTATTCG AAGGCTTAGA ATCCCTTGAG CTTATCTGTA TCGATGATAT TGATGCCATC GCAGGTCACC CCATTTGGGA AGAGGCGATA TTTCATCTCT ATAATCGCAT TGCTGAGCAC AAAGATTGTC ATTTGATTGT CAGTGGTAAA GCCTCGCCAA CGGAAGCGGG TTTTTTATTA CCTGACTTAG TGTCACGGAT GCAGTGGGGG TTAATTTATC AACTCCAACC TATGGCAGAT GATGAGAAGT TACTGGCATT GCAGCGCCGT GCTGCCATGC GGGGGTTACA GCTTTCAGAT GAGGTAGGGC GCTTTTTATT GACTCGAATG GCACGAGACC TGCGTACCTT ATTTGATGTG CTCGATAAGC TAGATAAAGC CTCAATGGTG CATCAGCGTA AGCTGACCAT ACCCTTTATT AAAGAAATGC TTAGGTTGTA G
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Protein sequence | MTQNSPRQLS LPVYLPDDET FQSYYPASGN DELIQKLQAS AQGGLSSSLY IYGPVKSGRT HLMHAACALA NDKDRRTLYI PLGIHASISP ALFEGLESLE LICIDDIDAI AGHPIWEEAI FHLYNRIAEH KDCHLIVSGK ASPTEAGFLL PDLVSRMQWG LIYQLQPMAD DEKLLALQRR AAMRGLQLSD EVGRFLLTRM ARDLRTLFDV LDKLDKASMV HQRKLTIPFI KEMLRL
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