| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1642 |
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| Symbol | |
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| ID | 4018117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1906748 |
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| End bp | 1907926 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637955652 |
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| Product | hypothetical protein |
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| Protein accession | YP_562649 |
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| Protein GI | 91792998 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3249] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00221365 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCA ATATTCCAGA GAATTTTATT ATGTTACACT CAGTGCACTT ATTTTTAATG
CGTTTATCCG ATCAAATGTT GAAAAAAATG CCAATGAAAC CATTAATTAC TCAATTATTT
GCCCTGAGCC TGTTGCTATT CACCTCGTTA AGCCAAGGCG TCGAGATTTC CAAGCTAGAT
GAAGCTGAGG TGGTGGTGGC ATCCCGTGCC AATGATGTCA AAGCAAAAGC CTTAGGGCAG
GCCCTGGCAT CTGTATTTCT TAAAAATTCG GGTACGCCAA GCGTGCTAGC GCATCCCCTA
GTGAAAATGC AGCTTAAACA GCCCGATGTA TTACTGGTTC AGTATGGCTA CACTGAGGTT
AACGGCGAAT TAATTCTCAC GGCAAGCTTT GATCATCAAA GAATTATCAA TACCTTAAGA
CAAGCAGATT TACCCGTCTG GGGTAGCCAA CGTCCTTTGA CCTTGTTCTG GTTAGCGCTA
GATGAAGGGG GCGATAAAGT GCTATTGGCT GATTCATCAG TATCTGAACT GCGTCAAGAA
CTGGAGCTTT CATCACGCAA CAATGGCATA CCCGTGTTGT TACCTGTGTT GGATTTAGAT
GATTTGATGG CGGTAAACGT GACCGATGTT CGCGGCATGT TTGTTGAGCC TGTGTCAAAA
GCATCGAACC GTTATCAGGC AGATTATTTC ACTTTGGTCG ATTTCGATAA GCAAGGTTCT
CACATTAATT TTACCCTTGC CTTGTACGAT AAAACCCGTA CCAATGGCGT CTTGATGCCA
TTATTGCGAC ATCAAGGTCA AGCTGCGGAT TATCAGCAAG CGGCTAAAGA TGTGATGGAG
AAGTTAGCCA ACTACTTTGT TAGCCAATAT GCGATAGCAG CAACAGGTGA AGGTAATGAA
ACTGAAGTCA CCTTTATGGG CCTCGGCAAA ATGACTCAAA CTGTGGCCTT AGAAAGTTAT
TTACGCCAAT TGAGTGCGGT CAAAAATATT AAAGTAAGCC AGATAAAAGG TGACAGCATT
CGCTATCAGG TTGAACTATT TGGCACAGTG GAAGATCTGC AGCGGTTATT GAATTTAGAC
CCTCGCCTGA ATGCCATAGA CAGTCAAGGG GGCGTCGATG CTTATTATGC GCCGCAAAGC
ACATCGGCCC AAGAATTACT CTATCAGTGG CGCGGTTAG
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| Protein sequence | MDINIPENFI MLHSVHLFLM RLSDQMLKKM PMKPLITQLF ALSLLLFTSL SQGVEISKLD
EAEVVVASRA NDVKAKALGQ ALASVFLKNS GTPSVLAHPL VKMQLKQPDV LLVQYGYTEV
NGELILTASF DHQRIINTLR QADLPVWGSQ RPLTLFWLAL DEGGDKVLLA DSSVSELRQE
LELSSRNNGI PVLLPVLDLD DLMAVNVTDV RGMFVEPVSK ASNRYQADYF TLVDFDKQGS
HINFTLALYD KTRTNGVLMP LLRHQGQAAD YQQAAKDVME KLANYFVSQY AIAATGEGNE
TEVTFMGLGK MTQTVALESY LRQLSAVKNI KVSQIKGDSI RYQVELFGTV EDLQRLLNLD
PRLNAIDSQG GVDAYYAPQS TSAQELLYQW RG
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