| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1641 |
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| Symbol | |
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| ID | 4018116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1905432 |
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| End bp | 1906655 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955651 |
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| Product | uracil-xanthine permease |
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| Protein accession | YP_562648 |
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| Protein GI | 91792997 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2233] Xanthine/uracil permeases |
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| TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000923826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGCC TGTTAATCCC ACTTCAAGGT GCACAAATGC TGTTTGTTGC ATTTGGTGCC
CTCGTACTCA TGCCTTTGCT CACAGGGTTA GACACCAGTG TTGCCCTGTT TACCGCAGGT
CTTGGTACCC TGCTATTTCA ATGGGTGACA AAACGGCAAG TGCCTATTTT TTTAGCCTCA
TCCTTTGCGT TTATCGCCCC AATTCTCTAC GGAGTGCAAA CCTGGGGGAT CCCCGCCACC
ATGGGGGGCT TAATGGCCGC AGGTGTGGTT TACTTGTTAT TAGGCTTGAT GGTGAAAGTC
CGTGGTAGCG GCTTTATTAA TACCTTACTG CCTCCCGTCG TTGTAGGGCC TGTGATCATC
ATCATAGGTC TAGGACTTGC ACCCGTAGCG GTGAATATGG CATTGGGCCG CTCAGGGGAT
GGCAGCATTG AAATTGTGGC TCAATCTACT GCCTTGATCA TTTCATTGCT GGCATTATCG
AGCACCATTA TCGTGGCCGT ATTTTCAAAG GGCATACTAA AGCTAATGCC AATACTGGCT
GGAATTCTAG TGGGTTATGC CGCCAGTTTA AGTTACGGTA TAGTGGATTT TAGCCCTGTG
ACTCATGCAG CTTGGCTTGC CATTCCCAAT TTTGTGGCCC CTGAATTCCA CTGGCAAGCC
ATTGCCTTTA TGATCCCTGT CGCCATCGCG CCTGCCGTTG AACACATAGG TGATATTTTG
GCCATTTCCA ATGTGACAGG TAAAGATTTT ATCAAGAAAC CTGGGCTTCA TCGTACTTTA
GCCGGTGACG GTATCGCCAC TATTGCGGCC TCTGCCTTAG GCGGGCCACC TAATACCACC
TACAGTGAAG TCACTGGGGC CATCACACTC ACCAAAATTT TTGACCCAAA AATCATGACC
TGGACGGCAG TAATAGCCAT TGTTCTCGCT TTTGTGGGTA AACTGGGGGC CTTAATGCAA
ACTATCCCAG TGCCTGTCAT GGGCGGCATC ATGTGTCTGC TGTTTGGCTC TATCGCGGCG
GTGGGGTTAA ATACCTTAAT TCGCAATCAA GTGGACTTAG CCGAGCCAAG AAACTTGAGC
ATAGTTGGCG TGACCTTAGT ATTCGGCATT GGCGGCATGG CATTTGGTAT TGGTGAGTTT
AGCCTAACTG GCATAAGCCT ATGCGGCATA GTGGCCATTG TAATGAACCT AGTGCTGCCC
AAAGTGAAAA CAGTCGCAAC CTAA
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| Protein sequence | MNRLLIPLQG AQMLFVAFGA LVLMPLLTGL DTSVALFTAG LGTLLFQWVT KRQVPIFLAS
SFAFIAPILY GVQTWGIPAT MGGLMAAGVV YLLLGLMVKV RGSGFINTLL PPVVVGPVII
IIGLGLAPVA VNMALGRSGD GSIEIVAQST ALIISLLALS STIIVAVFSK GILKLMPILA
GILVGYAASL SYGIVDFSPV THAAWLAIPN FVAPEFHWQA IAFMIPVAIA PAVEHIGDIL
AISNVTGKDF IKKPGLHRTL AGDGIATIAA SALGGPPNTT YSEVTGAITL TKIFDPKIMT
WTAVIAIVLA FVGKLGALMQ TIPVPVMGGI MCLLFGSIAA VGLNTLIRNQ VDLAEPRNLS
IVGVTLVFGI GGMAFGIGEF SLTGISLCGI VAIVMNLVLP KVKTVAT
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