Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1631 |
Symbol | |
ID | 4018106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1894062 |
End bp | 1895051 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637955641 |
Product | membrane-bound lytic murein transglycosylase B |
Protein accession | YP_562638 |
Protein GI | 91792987 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00716763 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTGCA AATCAGTAGT TGTATTTTGT GTATACCTAA CCTGCTGTAA CCTTGTTTCA GCGCAGGAGA GCGGGGCGAC TTTCTCTGAT TATCTATCAG GGCTTAAGCG TGTCGCATTG GAAGCTAACA TCTCGCCTAT GACCGTGGCG CAGCACTTTC CTAAAATCAA GCCTTTCAAG CGTGCTCAAG GTCATAATAG TGTCTTCGAA AACACTAATC TAGAGCAATA CATCCCAAAG AAAGTGCCTG ATATTCTCGT CAGTACTGGG CGCATTTTTT ATCAAGCCAA CGAAAAAGCT TTTGATCATA TTGCTACTAA ATATGGGGTG CAACCGCGCT TTCTTATTGC CCTATGGGGC TTGAGCTCCG ACTTTGGTGA ACGCCAAGGG CGTTATCCTG TGCTATCTGT GTTGGCCTCA TCGGCTTTTG AAGCGAGTCT AAGCGGGCAA GTGGATCATT ATGGTGAATT ATTCTATATT GATGAATTTA TTGCAGCTCT TAAAATTTTA GAACGCTATC CCTATCGCTT TGAAGATCTC ACCAGTAGCC AGCAGGGCAC CATGGGTCAT ATGCAAATAA GACCAAGCCA GTTTTTAGCC TATGCTAAAG ATGGCAGTGG TGATGGTCAT ATCGATATTT GGCATGATAT TAGCGATGCT ATGACAACCA CAGCCAATAT GCTACAAGAC ATAGGCTGGC AATCTGACTC AACTTGGGGC CGACAAATTA GGGCTACTAA AGCACTTAGT GCAGACAATA TCAGTCTTGC AGTGCAAAAA ACCTTCTCTG AATGGCAACA ATTAGGCATA AGGCGCTTCG AAGGCGGTGA TTTGCCCAAT CGTGACGATA TGCGGGTGTC CTTGCTCGCT CCCGATGGCA CAGATGGCCG CATGTATCTG ATTTATTTTA ATTATCGGGC TCTTAAACGG GTCAATCAAG ATGATAAATA CTTATTGGCT GCGACCTATT TGTCTGAAAG AATTAAATAA
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Protein sequence | MFCKSVVVFC VYLTCCNLVS AQESGATFSD YLSGLKRVAL EANISPMTVA QHFPKIKPFK RAQGHNSVFE NTNLEQYIPK KVPDILVSTG RIFYQANEKA FDHIATKYGV QPRFLIALWG LSSDFGERQG RYPVLSVLAS SAFEASLSGQ VDHYGELFYI DEFIAALKIL ERYPYRFEDL TSSQQGTMGH MQIRPSQFLA YAKDGSGDGH IDIWHDISDA MTTTANMLQD IGWQSDSTWG RQIRATKALS ADNISLAVQK TFSEWQQLGI RRFEGGDLPN RDDMRVSLLA PDGTDGRMYL IYFNYRALKR VNQDDKYLLA ATYLSERIK
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