| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1613 |
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| Symbol | |
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| ID | 4018088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1876424 |
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| End bp | 1877176 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955623 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_562620 |
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| Protein GI | 91792969 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATTC CAGCCATTGA TCTCATTGAC GGCCAAGTGG TGCGTTTATA CCAAGGTGAT
TACGACAAAC AGACCACCTT TGATTTAAGC CCGCTGGCAC AGCTTAAGTC TTACCAAGAC
CAAGGGGCAA AACTGCTGCA CATTGTCGAC TTAACCGGCG CTAAAGATCC AAACCAGCGT
CAAATTAAGT TGATAAGTGA GCTAGTCGCA GGCCTTGATG TGGACATTCA AGTGGGCGGC
GGTATTCGAA GTGAACAGCA AGTTACCGAA TTATTAGCCA TTGGCGTTAA GCGGGTGGTG
ATCGGCTCTT TAGCCGTTAA AGAGCCTGAG CTTGTGAAAA GCTGGCTTAA CAAATACGGC
AGTGATGCAA TATGTTTAGC CCTTGACGTC AACATTAACG CGAACGGCGA AAAAATTGTC
GCGGTATCGG GTTGGCAGTC CGCAGGCGGT AAAACACTTG AATCCTTGGT GGCCGAGTTT
GAACGCCCAG GCAGTAAACA AACAGCCCTA AAACATGCGT TAGTGACTGA CATTAGCCGT
GATGGCACCT TAACGGGCGC CAATACCGCG CTCTACACCG AACTTGCAGC CGCTTACCCA
ACTATTCTGT GGCAAGCCTC AGGGGGCATT GCAACCCTTG ATGATGTAAG CGCGGTAAAG
GACAGTAAAG CCGCTGGGAT CATTATCGGT AAAGCCCTGC TCATTAATCA ATTTACAGTA
GAGGAGGCAA TACAATGCTG GCCAAACGCA TAG
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| Protein sequence | MIIPAIDLID GQVVRLYQGD YDKQTTFDLS PLAQLKSYQD QGAKLLHIVD LTGAKDPNQR
QIKLISELVA GLDVDIQVGG GIRSEQQVTE LLAIGVKRVV IGSLAVKEPE LVKSWLNKYG
SDAICLALDV NINANGEKIV AVSGWQSAGG KTLESLVAEF ERPGSKQTAL KHALVTDISR
DGTLTGANTA LYTELAAAYP TILWQASGGI ATLDDVSAVK DSKAAGIIIG KALLINQFTV
EEAIQCWPNA
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