| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1604 |
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| Symbol | ihfA |
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| ID | 4018079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1868582 |
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| End bp | 1868881 |
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| Gene Length | 300 bp |
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| Protein Length | 99 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955614 |
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| Product | integration host factor subunit alpha |
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| Protein accession | YP_562611 |
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| Protein GI | 91792960 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0316087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACTTA CCAAAGCCGA AATGGCAGAA CATCTTTTTG AAACATTAGG CTTAAACAAG
CGCGTTGCCA AAGAGATGGT TGAGTCGTTC TTCGAAGAGA TTCGTGAAGC GCTCGAAAGT
GGTGAGCAGG TCAAGTTATC TGGCTTTGGC AACTTTGACC TTAGGGACAA GAATCAGAGA
CCGGGAAGGA ACCCAAAAAC AGGTGAAGAT ATTCCGATTT CAGCACGCCG AGTGGTAACA
TTCCGTCCCG GTCAGAAGCT GAAGGCTAGA GTGGAAGCTG CAAACTCTGG CAAGAAATAA
|
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| Protein sequence | MALTKAEMAE HLFETLGLNK RVAKEMVESF FEEIREALES GEQVKLSGFG NFDLRDKNQR
PGRNPKTGED IPISARRVVT FRPGQKLKAR VEAANSGKK
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