| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1571 |
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| Symbol | |
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| ID | 4018046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1828448 |
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| End bp | 1829299 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637955582 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_562579 |
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| Protein GI | 91792928 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTGCG AAGTAAAGAA AGCAAACCCC GAGTTTAAAG TGAATGAGTT ATGTCGCGCC
TTCGAAATAA ATTGCAGTAG TTTTTATTAT AAACCAATAC CGTTAAGTAT TAAGAAACAG
TCAGTTATGC AGTTGGTTGA GGAAGTTTTC ACTGATTCTT ACTCTACTTA TGGCAAACGA
AGAATACAGG CTGAACTACT TGATTTAGAT TGTAGAGTAG GTGTTTACGC TATTTCTACG
GTCATGAAAA ACTTGGGGCT AAGGGCGATT AGGCCAAAGA AAAAGCATTA CTATCCTAAC
CAAGGTGAGG AGCAAGTTTA CGCCCCTAAT TTGCTTAGAC GACAGTTTAA TCCTACGACT
TATAATACTC ACTGGGTTGG TGATATTACC TATATAAAAT CACATCAAGG CTGGAGTTAT
TTAGCCTGTG TGCTTGATTT AGGAACCAAA GAGATCGTTG GATATGCTTT ATCAAGTCAA
CCCAATGCAG CATTAGCGAC AGCGGCCTTA AATAACGCGA TACAACGTAA GAGGCCCAAT
ACACAGGCAT TGATGTTTCA CTCCGACCAG GGCTGTCAGT ACTCAGCCAA AGTGTTTAGA
GAGCGGCTAA AACACTTAGG TATCGAGCAA AGCATGAGTC GTAGAGGCAA TTGCTGGGAT
AATGCGGTGA TGGAACGATT TTTTAGGAGT TTAAAGACTG AAAGATTAAA CCATTTAGCA
TTTATAAATC ACAGCGCAGT AGTGAGCGTG GTTGAGCAAT ATATTCAGTT CTACAATTAC
AAACGCAGAC ATTCGGCAAT AGATTATAAG ACGCCACATC AAAAATATAA TGAGTTAAAA
AAAGCGGCTT AA
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| Protein sequence | MMCEVKKANP EFKVNELCRA FEINCSSFYY KPIPLSIKKQ SVMQLVEEVF TDSYSTYGKR
RIQAELLDLD CRVGVYAIST VMKNLGLRAI RPKKKHYYPN QGEEQVYAPN LLRRQFNPTT
YNTHWVGDIT YIKSHQGWSY LACVLDLGTK EIVGYALSSQ PNAALATAAL NNAIQRKRPN
TQALMFHSDQ GCQYSAKVFR ERLKHLGIEQ SMSRRGNCWD NAVMERFFRS LKTERLNHLA
FINHSAVVSV VEQYIQFYNY KRRHSAIDYK TPHQKYNELK KAA
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