| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1570 |
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| Symbol | |
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| ID | 4018044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1826662 |
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| End bp | 1828092 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637955580 |
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| Product | tRNA(Ile)-lysidine synthetase-like protein |
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| Protein accession | YP_562578 |
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| Protein GI | 91792927 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
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| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA CAGACATTTG CGCCAACATA GCGCGCCTTG CACTGCCATT ACTGACGCAC
TGTGCTTCTA AACCAGCAGC TAAACTAGTG CTGGCTTACA GCGGCGGCGT TGACTCAGAA
GTGCTCGCCG CAGGCTTAAG CTTATTCAGT CAATTTCATC CCGAGATAGA TTGCCGCTTA
TTGCATGTAC ATCATGGTCT CAGTGCCCAC GCCGATAGCT GGACTGAACA CTGCCGTAAG
CGCGCTGCCT TTTATGGCTT GCCACTCATA GTCGAGAAAG TCTCAGTGCA AAAAGGCAAG
CGTGAAAGCT TAGAAGCCAA GGCCAGAGCC GCCCGCTATC ATGCCATCGC TCAGCATTTA
CATCAGAATG ATATTTTGCT CACCGCACAC CATGAAGACG ATCAGCTCGA GACCTTGTTA
CTGGCGCTAA AGCGAGGCCA AGGCCCTAAA GGATTAGCCG CCATGGGGGA GTGTCAGCGA
AAGGACCATT ATTGGCTACT ACGGCCCTTG CTCAGTGTTT CACGGCAGCA GATAGAAGCC
TTAGCGGCAT CAGAAGCCCT AGTTCATATC GAAGATGACA GTAATCAAGA TGACAGTTTT
GATAGAAACT TCCTTCGCCT CGAAATCATC CCCGCCCTTA AGCGCCGCTG GCCAAGCTAT
GCCCAAACGG CCAGTCGCAG TGCTAGGTTA TGCGCCGAGC AGCAGGCGGC CATAGAAGAA
GAGGCTGCGT CGAGATTGCA GCCCTACTTG GATGAAACCA CGCCATTGGA GGGGACAGGG
TTTAGCCTCG CGGATTTTTC ATCTGAGAGT CTCATTTGGC AAAAACTGCT ATTTCGAAGC
TACCTCAGCA GCTTAGGTTT AGCCGCGCCT TCTTCATCAC AGCTAGATCA AATTATTCAG
CAGCAGTTAT TAGCCAAAGA AGATGCCAAG CTCAGTGTAG ATTGCGAGCA ATACCAAGTG
AAACGCTTCG CGGGTAAAGC TTTTGCGGTC GCCAGAGCCA CAGCCTCCAC TGACGCAGAG
AAAGCTTGCT TATTGCAGCA ATTATTGGCT GTGATTAATG GGGATAAAAC TTGCGTTAAT
ATTCCTAAAT CCTTTTTTTT TAGCCAGAAT AAGACTCAAG TCGCACCCAA ATGGACATTG
AGCATCAGTG CCACCGGTAT ACGTTTAGCC TTACCCCGTG ATTTAGCTTC GGTGAGTATT
AAATATGGCG CGCCAAGCAG TGTTAAATGT CAGCCACATT TTCGCCCTAA GGGCCGCGAG
CTTAAAAAGT TGTGGCAAGA GTTACAGATC CCACCTTGGC GCCGCGCCCA AGTGCCCTTG
ATCTATTATG GTGAGCATCT TGTTGCGGCA GTGGGGTTTT GGGTAGACAA AGCCTATTTG
GCCAAAGGCG ACGACTTAGG GGTACAGGTG GCGCTAGAAG CACTCAGATA A
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| Protein sequence | MNNTDICANI ARLALPLLTH CASKPAAKLV LAYSGGVDSE VLAAGLSLFS QFHPEIDCRL
LHVHHGLSAH ADSWTEHCRK RAAFYGLPLI VEKVSVQKGK RESLEAKARA ARYHAIAQHL
HQNDILLTAH HEDDQLETLL LALKRGQGPK GLAAMGECQR KDHYWLLRPL LSVSRQQIEA
LAASEALVHI EDDSNQDDSF DRNFLRLEII PALKRRWPSY AQTASRSARL CAEQQAAIEE
EAASRLQPYL DETTPLEGTG FSLADFSSES LIWQKLLFRS YLSSLGLAAP SSSQLDQIIQ
QQLLAKEDAK LSVDCEQYQV KRFAGKAFAV ARATASTDAE KACLLQQLLA VINGDKTCVN
IPKSFFFSQN KTQVAPKWTL SISATGIRLA LPRDLASVSI KYGAPSSVKC QPHFRPKGRE
LKKLWQELQI PPWRRAQVPL IYYGEHLVAA VGFWVDKAYL AKGDDLGVQV ALEALR
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