| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1567 |
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| Symbol | lpxB |
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| ID | 4018041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1820992 |
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| End bp | 1822143 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955577 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_562575 |
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| Protein GI | 91792924 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0268108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTCTC AAACATCTCA AATTGTCTTT GCCATGGTCG CCGGAGAAAT CTCCGGCGAT
ATATTAGGTG CAGGCTTAAT TAAATCACTT CAGAAAACCC ACCCTAATGC GCGCTTCGTC
GGCATTGGCG GTCCGCGAAT GGAAGCCTTA GGCTTTGAAA GCTTTTTTGC CCTTGAAGAA
TTATCTGTGA TGGGCATAGT CGAAGTTTTG TCTCGCTTAC CTAGGCTTAT CAAGGTTCGC
AGCAGCTTGA TTGAACAAAT TGTTGCCGCT AATCCTGATT GCTTTATCGG TATCGATGCT
CCAGATTTCA ATATCGGTCT TGAGCTTAAG CTTAAAGCCA AAGGCATCAA GACTGTGCAT
TACGTCAGCC CTTCGGTGTG GGCATGGCGG CCCAAACGGA TTTTCAAAAT TGCTAAGGCC
ACCCATATGG TGTTGTCTTT GTTGCCGTTT GAGAAAGCCT TCTACGACCA GCATCAAGTG
CCTTGTACCT TCGTGGGTCA TACATTGGCC GATGATATTC CCCTAGAGAG CCCTAAATTG
CCTGCGCGCA CGCTTTTGGG GTTAGATGCT GATGCTGAAT ATTTAGCCAT TTTGCCAGGT
TCTCGTAAAG GCGAATTAGC CCAGTTGAGT GAGCCATTTA TCAAGGCGGC AAGCTTGATT
AAGCAAGCCT GCCCAGACAT TAAATTTGTT ACGCCTTTAG TGAATGAAGC CCGCAGACAA
GAGTTCCTTG CCGCGTTAAC GCAGTTTGAT CCCGATCTGG AAATTGAACT TATCGATGGT
CAATCTCGAG AAGTCATGGC GGCAGCCGAC GGTATTTTAT TGGCCTCAGG CACAGCAACC
CTTGAAGCCA TGCTGGTGAA GCGTCCCATG GTGGTGGCCT ATAGGGTTAG CCCTATCACG
TACGCTATCG CTAAGCGCAT GATGAGCATC AGTCATTATT CACTGCCTAA CCTGTTAGCG
GGCACAGAGT TAGTGCCTGA GCTTATTCAA GAAAACTGCA CGCCAGAGAA AATAGCAAGC
GCTGTGCTCG CTCAGTTAAA CGGTGATTTC AGCGCGACAC AGGCGCGCTT TCTAGCACTG
CATAATCAGC TTAATTGCCA TGCCAGTGAC AGAGCCGCCG AGGCGGTGCT TAAGCTTATT
GAGCAAAAAT AA
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| Protein sequence | MRSQTSQIVF AMVAGEISGD ILGAGLIKSL QKTHPNARFV GIGGPRMEAL GFESFFALEE
LSVMGIVEVL SRLPRLIKVR SSLIEQIVAA NPDCFIGIDA PDFNIGLELK LKAKGIKTVH
YVSPSVWAWR PKRIFKIAKA THMVLSLLPF EKAFYDQHQV PCTFVGHTLA DDIPLESPKL
PARTLLGLDA DAEYLAILPG SRKGELAQLS EPFIKAASLI KQACPDIKFV TPLVNEARRQ
EFLAALTQFD PDLEIELIDG QSREVMAAAD GILLASGTAT LEAMLVKRPM VVAYRVSPIT
YAIAKRMMSI SHYSLPNLLA GTELVPELIQ ENCTPEKIAS AVLAQLNGDF SATQARFLAL
HNQLNCHASD RAAEAVLKLI EQK
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