| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1565 |
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| Symbol | fabZ |
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| ID | 4018039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1819730 |
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| End bp | 1820191 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637955575 |
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| Product | (3R)-hydroxymyristoyl-ACP dehydratase |
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| Protein accession | YP_562573 |
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| Protein GI | 91792922 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
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| TIGRFAM ID | [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000561633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTCAAATC AATTAAACAC CATGGATATT AAAGAGATCC TTAAGTACTT ACCTCACAGG
TATCCTTTTT TACTTATCGA TCGTGTGCTC GATTTTACTC GCGGCGAAAG TCTGCATGCG
ATTAAGAACG TCACCATTAA CGAGCCTTTC TTTCAGGGCC ATTTCCCAGT ACAACCTGTG
ATGCCAGGTG TATTGATTTT AGAGGCCATG GCACAAGCCA CAGGATTACT GGCCTTTAAA
ACCATGAGTG AAGAGCCATC GCCAAACGTG CTATATTATT TTGCTGGCAT AGATAAGGCC
AGATTCAAGC GCGTTGTGGG GCCTGGGGAC CAAATCCATT TCCATGTAAA AATGATTAAA
GAGCGCCGCG GGATTGGCGT ATTTATAGGT GAGGCATATG TGGATGGCGA ACTAGCTTGT
TCTGCTGAGA TCATGTGTGC ACGTAGAGAG ATCAGCAAGT GA
|
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| Protein sequence | MSNQLNTMDI KEILKYLPHR YPFLLIDRVL DFTRGESLHA IKNVTINEPF FQGHFPVQPV
MPGVLILEAM AQATGLLAFK TMSEEPSPNV LYYFAGIDKA RFKRVVGPGD QIHFHVKMIK
ERRGIGVFIG EAYVDGELAC SAEIMCARRE ISK
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