| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1563 |
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| Symbol | |
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| ID | 4018037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1818179 |
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| End bp | 1818676 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637955573 |
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| Product | outer membrane chaperone Skp (OmpH) |
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| Protein accession | YP_562571 |
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| Protein GI | 91792920 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2825] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000425102 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAATC GTGCATTAGT GACATTAAGC TTCCTCGCAG CGCCTATGAT GGCCAATGCA
CAGTCATTTG CAGTTGTCGA TATGGGCGAA GTGTTTGAGC AGCTACCACA GCGTGAGCAA
ATTTCTAAAT CATTAAAGTC TGAATTTGGT GACCGTGTCG CTGCAGTGCA GAAGATGCAA
GAAGAAATGC GCACTATGAT TGAAAAGCAG CAACGTGATG GCGCGCTAAT GAACGACACT
CAGAAAACTG AGTTGGTTCG TAAGATGGAG TCACTTAAGT CTGAGTTTCA ATTAAAAGGC
AAAGCGCTGG ATGAAGACAT GCGTCGTCGT CAAGGTGAAG AGCAAAACAA GTTACTTGTT
TTGGTTCAAA AAGCCATCAA CACCATAGCT GAAAAAGAAC AGTACGACAT GGTGTTCCAA
CGCGGTGCCG TTATTTATGT TAAGCCTACC GCTGACATCA GCGGTAAAGT GGTTGAAGCC
TTAAGCAAAG GCAAGTAA
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| Protein sequence | MVNRALVTLS FLAAPMMANA QSFAVVDMGE VFEQLPQREQ ISKSLKSEFG DRVAAVQKMQ
EEMRTMIEKQ QRDGALMNDT QKTELVRKME SLKSEFQLKG KALDEDMRRR QGEEQNKLLV
LVQKAINTIA EKEQYDMVFQ RGAVIYVKPT ADISGKVVEA LSKGK
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