| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1553 |
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| Symbol | |
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| ID | 4018026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1806768 |
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| End bp | 1807565 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955563 |
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| Product | methionine aminopeptidase |
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| Protein accession | YP_562561 |
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| Protein GI | 91792910 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0024] Methionine aminopeptidase |
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| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00648208 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATAG TCATTAAGAC AGCAGAAGAA ATCGAGAAAA TGCGCGCCGC CGGCAAACTT
GCCGCCGAGG TGTTAGCCAT GATTGCCCCC CATGTTAAAG CAGGCGTCAC TACAGACGAG
CTTAATGATA TCTGTGCCAA GTACACAGAA GAGCAAGGTG CGATATCGGC GCCGCTTAAT
TACCATGGCT TTCCAAAATC GATTTGCACC TCTGTTAATG ATGTTATCTG TCACGGCATT
CCATCAAGCT ACGTCTTAAA AGATGGCGAC ATACTCAATA TCGATATTAC CGTCATCAAA
GACGGCTTTC ATGGCGATAC CTCTAAGATG TTCCTCATCG GTGAAGTCAG CGCCAAAGAC
AAGCGCCTTT GCCGTATCGC TCAAGAAAGC CTGTACTTAG CCATACGTAA AGTCCGTCCG
GGCATGAAAC TCGGCGAGAT TGGCACTGCA ATAGAAAAAT TCATCAAGGC CAGCAAAACA
GGACTTGATA AGTACTCCAT AGTGCAAGAT TATTGTGGTC ATGGTATTGG CGCAGGCTTT
CATGAAGAGC CGCAAATCGT CCATTACAAG AACAATGATA AAACCGTGTT ACGTCCTGGT
ATGTGTTTCA CCATAGAGCC TATGATCAAT GCTGGCCGTC AAACTAGCGT ACTCGATAGA
GAAGATAACT GGACTGTCAC CACAGCCGAT GGCAAAAACT CGGCCCAGTG GGAACATACT
TTACTGGTTA CCGCCACTGG AGTTGAAGTG ATTACCTTGC GCGACGAAGA AGACTTCCCA
CGCATCATCA ATCATTAA
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| Protein sequence | MSIVIKTAEE IEKMRAAGKL AAEVLAMIAP HVKAGVTTDE LNDICAKYTE EQGAISAPLN
YHGFPKSICT SVNDVICHGI PSSYVLKDGD ILNIDITVIK DGFHGDTSKM FLIGEVSAKD
KRLCRIAQES LYLAIRKVRP GMKLGEIGTA IEKFIKASKT GLDKYSIVQD YCGHGIGAGF
HEEPQIVHYK NNDKTVLRPG MCFTIEPMIN AGRQTSVLDR EDNWTVTTAD GKNSAQWEHT
LLVTATGVEV ITLRDEEDFP RIINH
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