Gene Sden_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1545 
Symbol 
ID4018018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1798266 
End bp1798586 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content47% 
IMG OID637955555 
Producthypothetical protein 
Protein accessionYP_562553 
Protein GI91792902 
COG category[S] Function unknown 
COG ID[COG3098] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTATA GCCGTTGTAA AACCCATTTA GTTCGCTTGG AAGCCTTGTT AAAACAACAA 
AATCTGTGGA GCGATAGTGA GCCTTCGCCT GCCGCATTAG CCAGCACTGC GCCCTTTTCC
TGCGATACCA TGGCCTTCGA AGAGTGGCTG CAGTTTATTT TCATTCCAAA ACTGGGCGCG
ATTGTCGACG CGAAGCAGCC ATTGCCATCC CAAATGCACT TAGCCCCAAT GGCATCCCAA
GTCTGGCAAG CAAACCCTGT GTATCAGCCA ATCATTGAGC AACTTATCGC AATGGATGAT
TTTATTAATG CCGCAAAATA A
 
Protein sequence
MPYSRCKTHL VRLEALLKQQ NLWSDSEPSP AALASTAPFS CDTMAFEEWL QFIFIPKLGA 
IVDAKQPLPS QMHLAPMASQ VWQANPVYQP IIEQLIAMDD FINAAK