Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1544 |
Symbol | |
ID | 4018017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 1797134 |
End bp | 1798177 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637955554 |
Product | hypothetical protein |
Protein accession | YP_562552 |
Protein GI | 91792901 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGAAA TTACCACCTT AAGCCAGTTC CTAACCACGG CGAACACCCA ATTCCAAGTG TATGATTTAG GACGAAGAGT TCAACATATC GATGCTTTGG CATTCCATCA AATTGAATCC TTACTCGCAC CTTACCCCTA TCCTATTCAA GGCCATGCCC AGCTTGGATT AGTGTTTTGG CAACAGTCGG CTCAGCCCTA CATTTGGTTT TTAAAGCTAC CATTAGATGA GCAAGGTTTA TTATCGCCCG CGCCTCGCAG CCAATTTATT CAAATGATTT TAGATGCCTT AGGCAGAGAC TTAACCCAAG AACTAACTGA AGCACAGCAA GAACAGTTTG CAAATCATCC TTTTAGCTTC AAGCCCAATC AACACAAACT TGCGCTATTT AATGCCTTAG TGCGTCAGCA ATTAGGTCAA CCAGCATCAA GCCAGTATGA ATTTGCGGCG CAATACCTAT CAGAGCAAGC TGTAATTGGT GAGTCATCGG CGGTTGAAAA TGAAAGCCAT AGCTGGGAAC AACTTGGCCT TCAAGGGATT GCGGATGTGT GCGTCAGAGC CCAGAGCCTT GATAATATGG ATAGTTTAAT TCGAAGCTTC GACTTTAGCC CTCTGCCCGT GCACGCGGCA CTATGCCAGT GTTTAGAGCA TCTCCCCCTT GAGCCAAGCT TGGCTGAAAA AATTTACCTT TTATTTGAGC AAGCATCAAA TGAGCACAAA GCAAGTTATT TAGCCGCACT CGCGTCGAGC CCAAGCCTGT CAATCAAGGC GATTGCTCAC TTAGCGCAGC ACAATTTGCT GGACGCGAAC CACTTAGTCA CAATAGCGGC TAGAAATTGG CAGGCATTAA AAGATGACAG TTGCAGAAAA TCTTATCTCG AAGCCTTAGC TTTACAAGAA CAAGGCTTTT TCAATCAAGT TTTTGCTGAT ATTGTAGCTA TACCCAGTCT ACGTCAGGCA CTGCTGCTCG ATCTTCGTAA TCCAGAGCGC AGCAACATAC TTTCCATTGC CATTGGCGGT TTATTTAAGG CAGCTCAATC ATGA
|
Protein sequence | MTEITTLSQF LTTANTQFQV YDLGRRVQHI DALAFHQIES LLAPYPYPIQ GHAQLGLVFW QQSAQPYIWF LKLPLDEQGL LSPAPRSQFI QMILDALGRD LTQELTEAQQ EQFANHPFSF KPNQHKLALF NALVRQQLGQ PASSQYEFAA QYLSEQAVIG ESSAVENESH SWEQLGLQGI ADVCVRAQSL DNMDSLIRSF DFSPLPVHAA LCQCLEHLPL EPSLAEKIYL LFEQASNEHK ASYLAALASS PSLSIKAIAH LAQHNLLDAN HLVTIAARNW QALKDDSCRK SYLEALALQE QGFFNQVFAD IVAIPSLRQA LLLDLRNPER SNILSIAIGG LFKAAQS
|
| |