| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1541 |
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| Symbol | |
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| ID | 4018014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1794134 |
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| End bp | 1794736 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637955551 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_562549 |
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| Protein GI | 91792898 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.145291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGACA TTGGCGCGAC TGAAATAGGT ATCGATACCT TAGGTTCAAC TTCTATAGGC
TCAAATGCCG TAAGTTCAGT GATCATAGGT TTAGTTAATC CTAAAACACC CGTGAACGTT
GGCGGCATTA TGCGTGCCGC CGGCTGTTAT CGGGTCGATA GCGTGTGTTA TACCGGTCGG
CGTTACGAGC TTGCTGCCAA ATCCGGCGAC GCCCAGTATG ATGTCGACAC CAAAGACGCG
GCTAAGACTA TCCCTTTGAC TGGGGTGGAG TCGCTGCTGG ATCAGGTTCC CGTCGGGGCT
AAGATTATTT GCGTCGATCT TGTGGTTGGT GCTACGCCGC TACCGCATTT TGTCCACCCA
GAGCATGCTT TTTATATTTT CGGCCCCGAA GATGGCACCA TACCTCAAGT GCTTATCGAT
GCGGCGCATG AGGTAGTGTA TGTCCCGACG GTAGGCTGCA TGAATCTAGC CGCGTCAGTT
AATGTATTGC TGTACGACAG ATTGGCAAAA TCGGCGCAAA TGCTTGCAGG GGATGAGCTG
ATTAAGCAAA GTCGCGACAA TAACAACCGC ACTAAAGTTA AACATTGGCG TAATAAAGAA
TAG
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| Protein sequence | MSDIGATEIG IDTLGSTSIG SNAVSSVIIG LVNPKTPVNV GGIMRAAGCY RVDSVCYTGR
RYELAAKSGD AQYDVDTKDA AKTIPLTGVE SLLDQVPVGA KIICVDLVVG ATPLPHFVHP
EHAFYIFGPE DGTIPQVLID AAHEVVYVPT VGCMNLAASV NVLLYDRLAK SAQMLAGDEL
IKQSRDNNNR TKVKHWRNKE
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