| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1538 |
|---|
| Symbol | |
|---|
| ID | 4018011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 1791408 |
|---|
| End bp | 1792607 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637955548 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_562546 |
|---|
| Protein GI | 91792895 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAACC AAATCGAATC AAGTCAAACC AGCCCCATGA ACACTGAGCA GCAACTGCGC
TGGCTCAGTG CGTGTTACTT CTTCTTTTTT GCCATCTTGG GTGTCATGGT TCCCTACCTT
GGGGTATTTT TCGATAACCG AGGTTTTGAT GCCCAAGAAA TTGGCCTGTT GCTTGCCATC
CTGATGGGGA CGCGTATTAT CGCTCCTAAT CTGTGGGCCA TGGTTGCAGA TAAGACGGGT
ATGCGCGCCG AATTGATTAA ATTTGGCGCC GCGGCCGCGG CCATCACTTT CGTGAGTTTT
TTCTTCAAAG GCGGGGTGCT TTACTTATCC ATAAGCCTTG CTGTTTATAC CTTCTTTTGG
AATGCCATCC TAGCCCAGCT TGAAGTCATC ACCTTAGAAA CCTTAGGGGA TAAAGCCAAT
CAATACGGTA AAATCCGCAG CTTTGGCAGT ATCGGTTACA TTGTCTTGGT GGTTGGGGCC
GGCGTTGCCA TAGATACCTG GGGCACAGAA GTGCTGCCCA TCATAGGCAT GAGTCTGTTT
ATTGGCTTAC TTGCCTGTGC GCTGCCATTA CCCGCTAATC GAGTCGTCAT AGATAAACAT
GCTCCGGTGA GTAAGCTCAA ACTTGAAGCC GCCACAGTGT GGTTTCTGGT GTCGGCCATG
TTATTGCAAA TGAGTGCAGG GCCTTTTTAT GGCTTCTTTA TTTTGTATCT CAAGCAAGTG
GGTTACTCAG AAACGGCTGG TGGATTATTT GTTGCTCTTG GAGTAATAGC CGAAATCATC
ATGTTTATGT TCGCGCCTAG ACTATTAGGG CGTTATGGCA TCAAGTTTTT ATTGGTCGTG
TGCATGTTAA TGACGGCGCT GCGTTGGTTG CTGGTGGCGT TCGGCGCAGA CAGCTTAGCC
TTACTGGGCC TGAGTCAATT GCTGCATGCC TTTACCTTCG GCTTGACGCA CGCGGCATCG
ATTCAGTTTA TTCACAGGCA ATTTCCGCCC AGCCATAGAA GCAAAGGTCA GGCGTTATAC
GCTAGCCTCA GCTTTGGTGT CGGCGGCGCG CTGGGGACTT GGCTTAGCGG GGTGATTTGG
GGCGATGGCA GTGGCTCTGT GATGACTTGG ATCTTTGCAG CAAGCTGCGC TTTATTGGCC
ATGTTGGCGG TACTCGCCAT ACCGACGTTA TCGAGCAAGC AGGCTAGCGT TCAAAGCTGA
|
|---|
| Protein sequence | MANQIESSQT SPMNTEQQLR WLSACYFFFF AILGVMVPYL GVFFDNRGFD AQEIGLLLAI
LMGTRIIAPN LWAMVADKTG MRAELIKFGA AAAAITFVSF FFKGGVLYLS ISLAVYTFFW
NAILAQLEVI TLETLGDKAN QYGKIRSFGS IGYIVLVVGA GVAIDTWGTE VLPIIGMSLF
IGLLACALPL PANRVVIDKH APVSKLKLEA ATVWFLVSAM LLQMSAGPFY GFFILYLKQV
GYSETAGGLF VALGVIAEII MFMFAPRLLG RYGIKFLLVV CMLMTALRWL LVAFGADSLA
LLGLSQLLHA FTFGLTHAAS IQFIHRQFPP SHRSKGQALY ASLSFGVGGA LGTWLSGVIW
GDGSGSVMTW IFAASCALLA MLAVLAIPTL SSKQASVQS
|
|---|
| |