| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1530 |
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| Symbol | fadJ |
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| ID | 4018003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1777158 |
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| End bp | 1779284 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955540 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_562538 |
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| Protein GI | 91792887 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGA CATTTAATTT AGCCCGCCGC GATGATGGTA TCGCGGTGTT GACCATGGAC
GTCCCAGGCG AAACCATGAA CACCCTCAAA GCCGAATTTG GCCCAGAGAT AAGTGCTGTA
TTAGCTGAGA TAAAATCAGA CTCTAGCATT AAAGGCCTAG TGGTGATTTC GGGTAAAGCG
GACTCATTTG TTGCTGGCGC CGATATCAGC ATGTTGGATG CTTGCACCAG CGCGGACGCC
GCTAAAGCCT TATCTCAGCA AGGCCATCAA GTGTTTGCAG AGCTTGAAGG ATTAAGCATT
CCTGTGGTTG CAGCTATCAA TGGCGCTTGC CTTGGTGGCG GTTTAGAGCT TGCGTTAGCA
TGTCATTTAC GTGTGTGTAG TGATGATGCT AAAACTATGC TTGGGGTCCC AGAAGTGCAG
TTGGGGTTAC TGCCTGGCGG CGGCGGGACC CAGCGTCTAC CGCGCCTTGT TGGCATAACA
ACAGCGCTTG ATTTGATGCT AACCGGTAAG CAAGTACGTC CTAAGCAAGC CTTAAAAATG
GGTTTAGTTA ATGATGTGGT GCCAAACAGT ATCTTGCTTG AAACTGCGGT TAATTTAGCT
AAAAAAGGCA AAAAAACGGC TGCGCCAGTG AAGAAAAGCT TCATTAATAA AGTGTTAGAG
TCAACCAGCT TTAGCCGCGA TATTATTTTC GATCAGGCGC GCAAGCAAGT TGAGAAGAAA
ACTCAGGGTA ATTATCCTGC GCCAGGAAAA ATTATTGACT GCGTACGTCA AGGATTAAAC
AAAGGCATGG TAAAAGGCCT TGAAGTTGAG GCCACTCATT TTTCTACTCT AGTGATGTCA
TCAGAATCAG CGGCGCTTCG CAGTTTGTTT TTTGCCACCA CTGAAATGAA GAAAGAGACC
GGAGTCGATG GTGTTGAACC ACGTAAAGTG CGTAAAGCCG TGGTACTAGG TGGCGGCTTG
ATGGGCGGCG GTATCGCATC AGTTACCACC ACTAAAGCCA AGATCCCAGC TCGCGTTAAA
GACATTAGTG ACAAAGGCCT GAGTAATGCC TTAGCTTATG CTTATAAATT ATTGGATAAG
GGTGTTAAGC GCCGCCATAT GACACCATCA GCCCGTGATG GTTTAATGGC GCTGATGACC
ACAACCACTG AATATAAAGG CGTAAAAGAT GCCGATATTG TGGTTGAAGC GGTATTTGAA
GATTTAGCTC TTAAGCATCA GATGGTTAAA GATATAGAGC GTGAATGCGG CGAACATACC
ATTTTTGCCT CAAACACTTC GTCTTTGCCT ATTGGTCAAA TCGCTGCGGC CGCCGAGCGT
CCTGAAAACG TGATTGGTCT GCACTATTTC TCACCGGTTG AGAAAATGCC TTTGGTTGAA
GTTATTGCTC ATGAGAAAAC TTCGGCGCAA ACTATTGCAA CTACTGTGGC TTTTGCCCGC
AAGCAAGGCA AGACACCTAT CGTAGTTAAA GATGGCGCGG GCTTTTATGT GAACCGTATT
TTAGCGCTTT ACATGAATGA AGCGGCGCAG CTGTTACTGG AAGGTCAGCG TATCGAACAC
TTAGATAAGT CATTGGTTAA GTTTGGCTTC CCTGTGGGGC CTATGACCTT GCTTGATGAA
GTGGGCATAG ATGTGGGCGC CAAAATATCA CCGATTCTAG AAAAAGAATT GGGCGAGCGT
TTCCAAGCGC CAAGTGCATT TGCCAAGTTG TTAAATGATG ACCGTAAGGG GCGCAAGAAT
AGCAAAGGCT TCTACCAGTA TGGCCCTAAA GCGAAAAAAT CTAAGCTTGT TGATGAAAGC
GTATACGCTG TGCTTGGCAT TTTAGCGGCC TCTAACAAAG ACAGCAAAGA AATCAGTGAG
CGTTGTGTTA TTCAAATGCT TAATGAAGCA GTGCGCTGTT TAGAAGAAGG CATAATTGCT
TCACCACGGG ATGGTGATAT CGGCGCTATC TTCGGCATAG GTTTCCCTCC TTTCTTGGGC
GGCCCTTTCC GTTATATGGA CAGCCTTGGG GCTGCACATA TGGTGGCAAG ATTAGAGCAT
TATCAGAAGC TTCATGGTGA GCGTTTCGCC CCAAGTGAGA AGCTTAAAGC TATGGCTGCG
AATAGTCAGA CTTTTTACAC TAAGTAA
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| Protein sequence | MEKTFNLARR DDGIAVLTMD VPGETMNTLK AEFGPEISAV LAEIKSDSSI KGLVVISGKA
DSFVAGADIS MLDACTSADA AKALSQQGHQ VFAELEGLSI PVVAAINGAC LGGGLELALA
CHLRVCSDDA KTMLGVPEVQ LGLLPGGGGT QRLPRLVGIT TALDLMLTGK QVRPKQALKM
GLVNDVVPNS ILLETAVNLA KKGKKTAAPV KKSFINKVLE STSFSRDIIF DQARKQVEKK
TQGNYPAPGK IIDCVRQGLN KGMVKGLEVE ATHFSTLVMS SESAALRSLF FATTEMKKET
GVDGVEPRKV RKAVVLGGGL MGGGIASVTT TKAKIPARVK DISDKGLSNA LAYAYKLLDK
GVKRRHMTPS ARDGLMALMT TTTEYKGVKD ADIVVEAVFE DLALKHQMVK DIERECGEHT
IFASNTSSLP IGQIAAAAER PENVIGLHYF SPVEKMPLVE VIAHEKTSAQ TIATTVAFAR
KQGKTPIVVK DGAGFYVNRI LALYMNEAAQ LLLEGQRIEH LDKSLVKFGF PVGPMTLLDE
VGIDVGAKIS PILEKELGER FQAPSAFAKL LNDDRKGRKN SKGFYQYGPK AKKSKLVDES
VYAVLGILAA SNKDSKEISE RCVIQMLNEA VRCLEEGIIA SPRDGDIGAI FGIGFPPFLG
GPFRYMDSLG AAHMVARLEH YQKLHGERFA PSEKLKAMAA NSQTFYTK
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